RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ASB8Q9H765 288 aa23.58■■□□□ 1.37
PFDN2-201ENST00000368010 SARS2Q9NP81 518 aaKnown RBP23.58■■□□□ 1.37
PFDN2-201ENST00000368010 KCNK4Q9NYG8 393 aa23.58■■□□□ 1.37
PFDN2-201ENST00000368010 DNAJC16Q9Y2G8 782 aa23.58■■□□□ 1.37
PFDN2-201ENST00000368010 FREM2Q5SZK8 3169 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 A0A1W2PNU3 283 aaPredicted RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 E7EVH7 732 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 LDB2O43679 373 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 TLX3O43711 291 aaPredicted RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 TPH1P17752 444 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 RBMS1P29558 406 aaKnown RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 AKT1P31749 480 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 CA5AP35218 305 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 TMPRSS15P98073 1019 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 HHEXQ03014 270 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 DRICH1Q6PGQ1 229 aaPredicted RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 FOXR1Q6PIV2 292 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 IGF2-ASQ6U949 168 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 SLC9B2Q86UD5 537 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 PIM3Q86V86 326 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 RASGEF1AQ8N9B8 481 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 AVL9Q8NBF6 648 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 SNIP1Q8TAD8 396 aaKnown RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 SH3KBP1Q96B97 665 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 ZNF578Q96N58 590 aaPredicted RBP23.57■■□□□ 1.36
PFDN2-201ENST00000368010 RDH14Q9HBH5 336 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 ETNK1Q9HBU6 452 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 PRDM8Q9NQV8 689 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 ACACAQ13085 2346 aa23.57■■□□□ 1.36
PFDN2-201ENST00000368010 WDFY3Q8IZQ1 3526 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 PDZK1P1A8MUH7 402 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 MSH3P20585 1137 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 CXCR5P32302 372 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 LMAN1P49257 510 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 XIAPP98170 497 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 ZFP36L1Q07352 338 aaKnown RBP23.56■■□□□ 1.36
PFDN2-201ENST00000368010 NFATC2Q13469 925 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 POU6F1Q14863 301 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 LONRF2Q1L5Z9 754 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 USP53Q70EK8 1073 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 DCBLD2Q96PD2 775 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 RAB6BQ9NRW1 208 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 THSD1Q9NS62 852 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 PAK5Q9P286 719 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 CRLS1Q9UJA2 301 aa23.56■■□□□ 1.36
PFDN2-201ENST00000368010 ZFC3H1O60293 1989 aaKnown RBP23.55■■□□□ 1.36
PFDN2-201ENST00000368010 A0A087WV48 116 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 IGHV1OR21-1A0A087WYE8 117 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ZSCAN12O43309 604 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 KCNJ13O60928 360 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 GAS8O95995 478 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ITGALP20701 1170 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 IDSP22304 550 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 CD1CP29017 333 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 CTSCP53634 463 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ERVPABLB-1P60509 514 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 GPLD1P80108 840 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 SEPT6Q14141 434 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 RAB11FIP2Q7L804 512 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 TMPRSS9Q7Z410 1059 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 C11orf96Q7Z7L8 435 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ZNF761Q86XN6 746 aaPredicted RBP23.55■■□□□ 1.36
PFDN2-201ENST00000368010 SLITRK4Q8IW52 837 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 DNAAF3Q8N9W5 541 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ULK4Q96C45 1275 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ZNF514Q96K75 400 aaPredicted RBP23.55■■□□□ 1.36
PFDN2-201ENST00000368010 DNAJC1Q96KC8 554 aaKnown RBP23.55■■□□□ 1.36
PFDN2-201ENST00000368010 NUDT22Q9BRQ3 303 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ASCL3Q9NQ33 180 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 PIH1D1Q9NWS0 290 aaKnown RBP23.55■■□□□ 1.36
PFDN2-201ENST00000368010 DRG1Q9Y295 367 aaKnown RBP23.55■■□□□ 1.36
PFDN2-201ENST00000368010 JRKLQ9Y4A0 524 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 SLC30A1Q9Y6M5 507 aa23.55■■□□□ 1.36
PFDN2-201ENST00000368010 ZNF106Q9H2Y7 1883 aaKnown RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PRR19A6NJB7 356 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PLD2O14939 933 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 ETS1P14921 441 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 EIF2S3P41091 472 aaKnown RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 MLLT3P42568 568 aaPredicted RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PPM1FP49593 454 aaPredicted RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 CDH17Q12864 832 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 SEMA5AQ13591 1074 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 SEPT7Q16181 437 aaKnown RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PHF19Q5T6S3 580 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 TMEM220Q6QAJ8 160 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PPP1R21Q6ZMI0 780 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 SNX20Q7Z614 316 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PRUNE1Q86TP1 453 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 AMZ2Q86W34 360 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 FBXO39Q8N4B4 442 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 OR52K1Q8NGK4 314 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 OR10G6Q8NH81 332 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 PRR11Q96HE9 360 aaPredicted RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 AHCYL2Q96HN2 611 aaKnown RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 SLC46A1Q96NT5 459 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.54■■□□□ 1.36
PFDN2-201ENST00000368010 ZMYND15Q9H091 742 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 HOMER3Q9NSC5 361 aa23.54■■□□□ 1.36
PFDN2-201ENST00000368010 CPNE7Q9UBL6 633 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms