RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 PGAP2Q9UHJ9 254 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ATP6V1HQ9UI12 483 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 PLA2G4CQ9UP65 541 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CACNB4O00305 520 aaPredicted RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 IL1RL1Q01638 556 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 LIPEQ05469 1076 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ZC3H12BQ5HYM0 836 aaKnown RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 TMEM63BQ5T3F8 832 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CERCAMQ5T4B2 595 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CASP12Q6UXS9 341 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ZNF655Q8N720 491 aaPredicted RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 ASZ1Q8WWH4 475 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 OTUB2Q96DC9 234 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CMTM7Q96FZ5 175 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TTPALQ9BTX7 342 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 MECRQ9BV79 373 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SARDHQ9UL12 918 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 FAM92AA1XBS5 289 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 KCNJ13O60928 360 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 BANF1O75531 89 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SERPINB7O75635 380 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 FABP3P05413 133 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CHI3L1P36222 383 aaPredicted RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 CXCR4P61073 352 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SP2Q02086 613 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 LRRC36Q1X8D7 754 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 MAP1SQ66K74 1059 aaPredicted RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 PPP2R2DQ66LE6 453 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 NIPAL1Q6NVV3 410 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 LUZP2Q86TE4 346 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 HPS6Q86YV9 775 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SYT12Q8IV01 421 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 OXR1Q8N573 874 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 BEND7Q8N7W2 519 aaPredicted RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 TRPM4Q8TD43 1214 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 HDAC10Q969S8 669 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CAMK1GQ96NX5 476 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SPG21Q9NZD8 308 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TK2O00142 265 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 GPR32O75388 356 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CELF2O95319 508 aaKnown RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 PIM1P11309 404 aaPredicted RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 SELPP16109 830 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 EPHA3P29320 983 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TCEA2Q15560 299 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ZSWIM7Q19AV6 140 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SDE2Q6IQ49 451 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TAPT1Q6NXT6 567 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CDC73Q6P1J9 531 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 FAM171BQ6P995 826 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ZZZ3Q8IYH5 903 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 HCAR2Q8TDS4 363 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 UBTD2Q8WUN7 234 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 LRRC58Q96CX6 371 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TMCO6Q96DC7 493 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 LINGO1Q96FE5 620 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ZNF558Q96NG5 402 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 C16orf70Q9BSU1 422 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 NLNQ9BYT8 704 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SIAEQ9HAT2 523 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TM9SF3Q9HD45 589 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 AFF4Q9UHB7 1163 aaKnown RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 CLDN25C9JDP6 229 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 RGS10O43665 173 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 STX11O75558 287 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 NMBRP28336 390 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 TIE1P35590 1138 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 GTF2H2Q13888 395 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 MPP2Q14168 576 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ZNF423Q2M1K9 1284 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 RBM20Q5T481 1227 aaKnown RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 GTF2H2CQ6P1K8 395 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 SLC13A3Q8WWT9 602 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CELF6Q96J87 481 aaKnown RBP7.23□□□□□ -1.25
VTA1-202ENST00000367630 PWWP2AQ96N64 755 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 COPS8Q99627 209 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 ADAM2Q99965 735 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CYP4F12Q9HCS2 524 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 CRYL1Q9Y2S2 319 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 PCDHGB1Q9Y5G3 927 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 GMPPBQ9Y5P6 360 aa7.23□□□□□ -1.25
VTA1-202ENST00000367630 GSAPA4D1B5 854 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 GLTPD2A6NH11 291 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 DLX3O60479 287 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 ABCB7O75027 752 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 CST1P01037 141 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 MC4RP32245 332 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 MAPK10P53779 464 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 PCBP2Q15366 365 aaKnown RBP eCLIP7.22□□□□□ -1.252e-6■□□□□ 10.9
VTA1-202ENST00000367630 GLYATQ6IB77 296 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 STK32CQ86UX6 486 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 ARL10Q8N8L6 244 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 OR52E4Q8NGH9 312 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 PROX1Q92786 737 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 GLMNQ92990 594 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 CCDC115Q96NT0 180 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 C11orf84Q9BUA3 381 aaPredicted RBP7.22□□□□□ -1.25
VTA1-202ENST00000367630 TMEM245Q9H330 911 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 EBF3Q9H4W6 596 aa7.22□□□□□ -1.25
VTA1-202ENST00000367630 NECTIN3Q9NQS3 549 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms