RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SERPINB8P50452 374 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 CCR5P51681 352 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 ADARP55265 1226 aaKnown RBP20.42■□□□□ 0.86
SHISA4-201ENST00000362011 DMWDQ09019 674 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 LPAL2Q16609 132 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 RBM20Q5T481 1227 aaKnown RBP20.42■□□□□ 0.86
SHISA4-201ENST00000362011 PNCKQ6P2M8 343 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 TIFABQ6ZNK6 161 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 LONP2Q86WA8 852 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 SLC41A1Q8IVJ1 513 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 PELI3Q8N2H9 469 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 DENND6BQ8NEG7 585 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 HEXDCQ8WVB3 486 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 RLN3Q8WXF3 142 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 SPACA7Q96KW9 195 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 AARSD1Q9BTE6 412 aaKnown RBP20.42■□□□□ 0.86
SHISA4-201ENST00000362011 CLPBQ9H078 707 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 SEMA4GQ9NTN9 838 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 SENP1Q9P0U3 644 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 COMMD10Q9Y6G5 202 aa20.42■□□□□ 0.86
SHISA4-201ENST00000362011 LRP4O75096 1905 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 TNRC6BQ9UPQ9 1833 aaKnown RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 IGLV3-16A0A075B6K0 115 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 A0A1W2PPM1 405 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 CFAP99D6REC4 459 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 INPP4BO15327 924 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 OR1I1O60431 355 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 NDUFS2O75306 463 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 SLC25A14O95258 325 aaPredicted RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 PKMP14618 531 aaKnown RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 NSG1P42857 185 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 SLC12A2P55011 1212 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 POU4F1Q01851 419 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 SIM2Q14190 667 aaPredicted RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 USP10Q14694 798 aaKnown RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 HECTD2Q5U5R9 776 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 KCTD16Q68DU8 428 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 ADAMTSL4Q6UY14 1074 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 SRRM1Q8IYB3 904 aaKnown RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 PLA2G15Q8NCC3 412 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 DCUN1D1Q96GG9 259 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 LENG8Q96PV6 779 aaPredicted RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 NDNQ99608 321 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 BOCQ9BWV1 1114 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 GPR174Q9BXC1 333 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 P2RY12Q9H244 342 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 C6orf106Q9H6K1 298 aaPredicted RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 MBNL1Q9NR56 388 aaKnown RBP20.41■□□□□ 0.86
SHISA4-201ENST00000362011 GNPTGQ9UJJ9 305 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 SLC39A10Q9ULF5 831 aa20.41■□□□□ 0.86
SHISA4-201ENST00000362011 FOXO6A8MYZ6 492 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 C10orf142B7Z368 130 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 H3BQF6 201 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 TPP1O14773 563 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 SLC31A1O15431 190 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 ESR1P03372 595 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 RALBP11234 206 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 MSH3P20585 1137 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 IGFALSP35858 605 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 FNTBP49356 437 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 ZNF549Q6P9A3 640 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 PRR23CQ6ZRP0 262 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 EXOC3L1Q86VI1 746 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 ISL2Q96A47 359 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 CENPTQ96BT3 561 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 TSPAN17Q96FV3 270 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 SNX15Q9NRS6 342 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 CNOT6Q9ULM6 557 aaKnown RBP20.4■□□□□ 0.86
SHISA4-201ENST00000362011 ACTL7BQ9Y614 415 aa20.4■□□□□ 0.86
SHISA4-201ENST00000362011 RAD51BO15315 384 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 LATO43561 262 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 FOXD2O60548 495 aaPredicted RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 RFPL1O75677 317 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 FSBPO95073 299 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 ALDOAP04075 364 aaKnown RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 SAT1P21673 171 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 HNRNPA2B1P22626 353 aaKnown RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 TYK2P29597 1187 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 NUDT1P36639 197 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 MAGOHP61326 146 aaKnown RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 USP39Q53GS9 565 aaKnown RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 CTSL3PQ5NE16 218 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 PTRHD1Q6GMV3 140 aaKnown RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 PRR23BQ6ZRT6 265 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 HEATR4Q86WZ0 1026 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 FAM160A2Q8N612 972 aaPredicted RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 FRMD1Q8N878 549 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 ACVR1CQ8NER5 493 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 CCDC97Q96F63 343 aaPredicted RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 HIC2Q96JB3 615 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 SERAC1Q96JX3 654 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 BIRC8Q96P09 236 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 KLF6Q99612 283 aaPredicted RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 ZCCHC2Q9C0B9 1178 aaKnown RBP20.39■□□□□ 0.85
SHISA4-201ENST00000362011 PCED1AQ9H1Q7 454 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 CAB39LQ9H9S4 337 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 FZD3Q9NPG1 666 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 VWA7Q9Y334 891 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 ZFHX4Q86UP3 3567 aa20.39■□□□□ 0.85
SHISA4-201ENST00000362011 SPAG17Q6Q759 2223 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms