RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SUV39H2Q9H5I1 410 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 TDP1Q9NUW8 608 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 EXD2Q9NVH0 621 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 FBXW2Q9UKT8 454 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 SUV39H1O43463 412 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 ANXA4P09525 319 aaPredicted RBP18.42■□□□□ 0.54
CLIP2-202ENST00000361545 NSG1P42857 185 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 GTF2H2Q13888 395 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 GTF2H2CQ6P1K8 395 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 MED27Q6P2C8 311 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 NAPRTQ6XQN6 538 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 KIAA0408Q6ZU52 694 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 SLC43A3Q8NBI5 491 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 OR13C4Q8NGS5 318 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 PPM1MQ96MI6 270 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 DCUN1D5Q9BTE7 237 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 TRIM43BA6NCK2 446 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 ZNF24P17028 368 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 PTGER3P43115 390 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 KIR3DL1P43629 444 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 FBXW8Q8N3Y1 598 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 CELF5Q8N6W0 485 aaKnown RBP18.42■□□□□ 0.54
CLIP2-202ENST00000361545 SMYD1Q8NB12 490 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 LEMD2Q8NC56 503 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 SNRNP27Q8WVK2 155 aaKnown RBP18.42■□□□□ 0.54
CLIP2-202ENST00000361545 PAPOLBQ9NRJ5 636 aaKnown RBP18.42■□□□□ 0.54
CLIP2-202ENST00000361545 TSC22D4Q9Y3Q8 395 aa18.42■□□□□ 0.54
CLIP2-202ENST00000361545 ESR1P03372 595 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 NAIF1Q69YI7 327 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ZNF248Q8NDW4 579 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 VANGL1Q8TAA9 524 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 NTAN1Q96AB6 310 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 SIRPGQ9P1W8 387 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 IL36AQ9UHA7 158 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 GMPPBQ9Y5P6 360 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 PDE4DIPQ5VU43 2346 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A9O60656 530 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 TNFAIP8O95379 198 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 COL6A1P12109 1028 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A6P19224 532 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A1P22309 533 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A4P22310 534 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A3P35503 534 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A5P35504 534 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 SMIM11AP58511 58 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 AMIGO2Q86SJ2 522 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 TMEM110Q86TL2 294 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A7Q9HAW7 530 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A10Q9HAW8 530 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 UGT1A8Q9HAW9 530 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 PRDM4Q9UKN5 801 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 OR51F1A6NGY5 319 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 DNM1LO00429 736 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 METTL18O95568 372 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 HLA-DQB2P05538 268 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 TFPIP10646 304 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ZNF37AP17032 561 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ACTR1BP42025 376 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ACTR1AP61163 376 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ACAP2Q15057 778 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 AMZ1Q400G9 498 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 Q6ZVU0 165 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 TERB1Q8NA31 727 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 SIPA1Q96FS4 1042 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 EIF2B4Q9UI10 523 aaKnown RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 CNOT6Q9ULM6 557 aaKnown RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 TRAFD1O14545 582 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 TRIM24O15164 1050 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ACVRL1P37023 503 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 USP46P62068 366 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 ARL13AQ5H913 290 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 GDPD4Q6W3E5 623 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 CLVS1Q8IUQ0 354 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 CACTIN-AS1Q8N1I8 211 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 SRFBP1Q8NEF9 429 aaKnown RBP18.41■□□□□ 0.54
CLIP2-202ENST00000361545 NUS1Q96E22 293 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 INSL5Q9Y5Q6 135 aa18.41■□□□□ 0.54
CLIP2-202ENST00000361545 SLC35G6P0C7Q6 338 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 TCF4P15884 667 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 TAS2R41P59536 307 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 BNIP2Q12982 314 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 IL23RQ5VWK5 629 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 ENPP7Q6UWV6 458 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 RNF19BQ6ZMZ0 732 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 ZNF461Q8TAF7 563 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 C7orf43Q8WVR3 580 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 IGSF9Q9P2J2 1179 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SUCOQ9UBS9 1254 aaKnown RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 IKZF3Q9UKT9 509 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 C9JVG2 144 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 NRP2O60462 931 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 MATN4O95460 622 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 CSF2RAP15509 400 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 UGT2B15P54855 530 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 RFTN1Q14699 578 aaPredicted RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 NET1Q7Z628 596 aaPredicted RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 OR2T12Q8NG77 320 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms