RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SLC9B1Q4ZJI4 515 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 LRRC73Q5JTD7 316 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 IER5LQ5T953 404 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 LIPMQ5VYY2 423 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 BRAT1Q6PJG6 821 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ZYG11AQ6WRX3 759 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 NAPRTQ6XQN6 538 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 LYSMD3Q7Z3D4 306 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GALNT7Q86SF2 657 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 HPS6Q86YV9 775 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 TTC30BQ8N4P2 665 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 KLHL32Q96NJ5 620 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ACOX2Q99424 681 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GPR22Q99680 433 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 DRC3Q9H069 523 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 POLR3BQ9NW08 1133 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 MATN2O00339 956 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 PFDN6O15212 129 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 KAT7O95251 611 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 PSMA3P25788 255 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 PMLP29590 882 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 HNF1BP35680 557 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GMPRP36959 345 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GRIA2P42262 883 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 SLC12A2P55011 1212 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ZNF234Q14588 700 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 SKIV2LQ15477 1246 aaKnown RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ARSIQ5FYB1 569 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 CWF19L1Q69YN2 538 aaKnown RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 TXNDC11Q6PKC3 985 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 KBTBD6Q86V97 674 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 KYQ8NBH2 561 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ERLEC1Q96DZ1 483 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 LENG8Q96PV6 779 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 BTBD9Q96Q07 612 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 TRIM4Q9C037 500 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 CAB39LQ9H9S4 337 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 C6orf203Q9P0P8 240 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 ADAMTS6Q9UKP5 1117 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 SLC39A10Q9ULF5 831 aa13.05□□□□□ -0.32
SQSTM1-201ENST00000360718 GOLGA8QA0A0J9YX86 632 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 EDDM13A0A1B0GTR0 161 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 GOLGA8OA6NCC3 632 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 A8MX80 341 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 GOLGA8NF8WBI6 632 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 ZBTB14O43829 449 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 LEFTY1O75610 366 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 PRSS56P0CW18 603 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 OGNP20774 298 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 LEPRP48357 1165 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 IRF9Q00978 393 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 USP10Q14694 798 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 TRIP10Q15642 601 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 CDKN3Q16667 212 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 TCHHL1Q5QJ38 904 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 AP1ARQ63HQ0 302 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 LDB1Q86U70 411 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 ICA1LQ8NDH6 482 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 SCYL1Q96KG9 808 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 C19orf43Q9BQ61 176 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 BPIFA1Q9NP55 256 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 FAM95CA0A1B0GW59 222 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 NPIPB15A6NHN6 443 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 PRNPP04156 253 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 PIM1P11309 404 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 VCLP18206 1134 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 SAT1P21673 171 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 XPAP23025 273 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 PIK3R1P27986 724 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 CSRP3P50461 194 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 CLCN5P51795 746 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 METAP1P53582 386 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 SH3BGRP55822 239 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 POLE2P56282 527 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 LRRC36Q1X8D7 754 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 HNRNPA1L2Q32P51 320 aaKnown RBP13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 POM121L1PQ3SYA9 428 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 MMEL1Q495T6 779 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 ZNF789Q5FWF6 425 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 TPRG1Q6ZUI0 275 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
SQSTM1-201ENST00000360718 CPSF7Q8N684 471 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms