RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 F8W8V4 182 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TRIM38O00635 465 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TPP1O14773 563 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DNAJC6O75061 913 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 VAPBO95292 243 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 POLBP06746 335 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ACRV1P26436 265 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 AK4P27144 223 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PBLDP30039 288 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CDKN1CP49918 316 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DUSP3P51452 185 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SLC7A5Q01650 507 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DHX9Q08211 1270 aaKnown RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 THOC5Q13769 683 aaKnown RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SMAD1Q15797 465 aaKnown RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 KHDC1Q4VXA5 237 aaKnown RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 FNBP1LQ5T0N5 605 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 LVRNQ6Q4G3 990 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TMEM220Q6QAJ8 160 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DBX2Q6ZNG2 339 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 KANSL1Q7Z3B3 1105 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SDCCAG8Q86SQ7 713 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 MMGT1Q8N4V1 131 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CCL4L1Q8NHW4 92 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 MFSD3Q96ES6 412 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SCARF2Q96GP6 870 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ZNF514Q96K75 400 aaPredicted RBP18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 LRRC1Q9BTT6 524 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DLL3Q9NYJ7 618 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 KCNK6Q9Y257 313 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DNAJC16Q9Y2G8 782 aa18.92■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TDRD6O60522 2096 aaKnown RBP18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 LAMA1P25391 3075 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TNFSF14O43557 240 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SNX2O60749 519 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 KCNK5O95279 499 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 FUCA1P04066 466 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PRSS56P0CW18 603 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CEACAM1P13688 526 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PGAM1P18669 254 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 FOXN2P32314 431 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SIM1P81133 766 aaPredicted RBP18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CAV1Q03135 178 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ACVR1Q04771 509 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 NR0B2Q15466 257 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 C6orf132Q5T0Z8 1188 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DUPD1Q68J44 220 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 MRNIPQ6NTE8 343 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CERS6Q6ZMG9 384 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CENPUQ71F23 418 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 RASGEF1AQ8N9B8 481 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 GABPB2Q8TAK5 448 aaPredicted RBP18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 GPBAR1Q8TDU6 330 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CFAP36Q96G28 342 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 NAT9Q9BTE0 207 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 VPS37BQ9H9H4 285 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 KLC4Q9NSK0 619 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TREX1Q9NSU2 369 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TAAR2Q9P1P5 351 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PLEKHM1Q9Y4G2 1056 aa18.91■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SPAARA0A1B0GVQ0 90 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CD3EAPO15446 510 aaKnown RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ATP1B2P14415 290 aaPredicted RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ZNF7P17097 686 aaPredicted RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PSMA3P25788 255 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CA5AP35218 305 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PLTPP55058 493 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 GUCY2DQ02846 1103 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PDIA2Q13087 525 aaKnown RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ITIH4Q14624 930 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DBN1Q16643 649 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ANKRD20A4Q4UJ75 823 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PPM1JQ5JR12 505 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 HP1BP3Q5SSJ5 553 aaPredicted RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 KIAA0930Q6ICG6 404 aaPredicted RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 DGLUCYQ7Z3D6 616 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 PIANPQ8IYJ0 282 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 ZDHHC1Q8WTX9 485 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SGF29Q96ES7 293 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 SIGLEC10Q96LC7 697 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 APOLD1Q96LR9 279 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 C20orf96Q9NUD7 363 aaPredicted RBP18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 FAM8A1Q9UBU6 413 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 CHMP2BQ9UQN3 213 aa18.9■□□□□ 0.62
HLA-DRB1-201ENST00000360004 TRBV5-4A0A0C4DH59 114 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CPED1A4D0V7 1026 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 PDZK1P1A8MUH7 402 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TM4SF5O14894 197 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 CHUKO15111 745 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 ZNF500O60304 480 aaPredicted RBP18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NDUFS3O75489 264 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 BANF1O75531 89 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 USP1O94782 785 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TTC4O95801 387 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 SLC2A4P14672 509 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 NSG1P42857 185 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 MAGEA3P43357 314 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 TTPAP49638 278 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 LONRF1Q17RB8 773 aa18.89■□□□□ 0.61
HLA-DRB1-201ENST00000360004 GLE1Q53GS7 698 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms