RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 UGT1A6P19224 532 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 UGT1A1P22309 533 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 UGT1A4P22310 534 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 UGT1A3P35503 534 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 UGT1A5P35504 534 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ETV3P41162 512 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 P2RY2P41231 377 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 LIG3P49916 1009 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 STARD6P59095 220 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 CSHL1Q14406 222 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ATP13A5Q4VNC0 1218 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 CTSL3PQ5NE16 218 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 HENMT1Q5T8I9 393 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 PTRHD1Q6GMV3 140 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF765Q7L2R6 523 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 CYP2U1Q7Z449 544 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 TECPR1Q7Z6L1 1165 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 CPLX4Q7Z7G2 160 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 PIM3Q86V86 326 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 NUDCD3Q8IVD9 361 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 LRRC34Q8IZ02 419 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 SUMF1Q8NBK3 374 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 TXNDC5Q8NBS9 432 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 CXorf40AQ8TE69 158 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 SREK1Q8WXA9 508 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF75CPQ92670 426 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 KCNJ9Q92806 393 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 NXNL1Q96CM4 212 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ERLEC1Q96DZ1 483 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 DTD2Q96FN9 168 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 COQ10AQ96MF6 247 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 BIRC8Q96P09 236 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM107BQ9H098 131 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF358Q9NW07 568 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 CD84Q9UIB8 345 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 TRMT6Q9UJA5 497 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 RUVBL2Q9Y230 463 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 OAS3Q9Y6K5 1087 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 KANSL1LA0AUZ9 987 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 SHISA7A6NL88 538 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 F8W8V4 182 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 NDUFAB1O14561 156 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 AP1G1O43747 822 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 LZTS3O60299 673 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 NIPSNAP2O75323 286 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 CCDC166P0CW27 439 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 CPA3P15088 417 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 DRD4P21917 467 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 NSG1P42857 185 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 GLRBP48167 497 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 PGGT1BP53609 377 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 RPS14P62263 151 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 DLG1Q12959 904 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 PCLAFQ15004 111 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 PIP5KL1Q5T9C9 394 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 ATG16L1Q676U5 607 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 CACUL1Q86Y37 369 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 HDDC3Q8N4P3 179 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 RPLP0P6Q8NHW5 317 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 HEXDCQ8WVB3 486 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 AP2M1Q96CW1 435 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 NUS1Q96E22 293 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 UBXN10Q96LJ8 280 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 CCT8L2Q96SF2 557 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 COPS8Q99627 209 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 GPR21Q99679 349 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 MRPL57Q9BQC6 102 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 MECRQ9BV79 373 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 RIOK2Q9BVS4 552 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 ABCG8Q9H221 673 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 RABEP2Q9H5N1 569 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 LTB4R2Q9NPC1 389 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 IGSF5Q9NSI5 407 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 SIRPGQ9P1W8 387 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 COPG2Q9UBF2 871 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 FADS3Q9Y5Q0 445 aa13.7□□□□□ -0.22
PDLIM5-203ENST00000359265 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 CFAP99D6REC4 459 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 KLF11O14901 512 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 TSPAN6O43657 245 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 DNAJC6O75061 913 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 ADAM23O75077 832 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 ATG13O75143 517 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 DNTTP04053 509 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 RBP1P09455 135 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 MYL2P10916 166 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 RALBP11234 206 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 C6P13671 934 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 BGNP21810 368 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 CD72P21854 359 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 ALDH3A1P30838 453 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 AKT1P31749 480 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 CA5AP35218 305 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 DRD3P35462 400 aa13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-203ENST00000359265 COPAP53621 1224 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms