RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CSGALNACT1Q8TDX6 532 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 C12orf66Q96MD2 445 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ADAMTS10Q9H324 1103 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 C12orf65Q9H3J6 166 aaKnown RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 SPON1Q9HCB6 807 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 PTPN9P43378 593 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 AIF1P55008 147 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CDH8P55286 799 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF234Q14588 700 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 SFT2D3Q587I9 215 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ADNP2Q6IQ32 1131 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 C9orf43Q8TAL5 461 aaPredicted RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ELOVL4Q9GZR5 314 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 UBQLN2Q9UHD9 624 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ABCC6O95255 1503 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TISP43B9A030 160 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 PLD2O14939 933 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TSPAN3O60637 253 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ACSL1P33121 698 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 UBE2J2Q8N2K1 259 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TBATAQ96M53 351 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM106CQ9BVX2 250 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TRIM2Q9C040 744 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 NEK6Q9HC98 313 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CLEC4AQ9UMR7 237 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 C3P01024 1663 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 KANTRA0A1W2PQU2 76 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ANKRD63C9JTQ0 380 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 FGF1P05230 155 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CDH15P55291 814 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CYP2A13Q16696 494 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 EML3Q32P44 896 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 IQCCQ4KMZ1 466 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ZDHHC24Q6UX98 284 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TMEM17Q86X19 198 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 IQCF2Q8IXL9 164 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 LINGO1Q96FE5 620 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 MSANTD3Q96H12 275 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 LHX5Q9H2C1 402 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 EIF2B3Q9NR50 452 aaKnown RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 H7C4K7 107 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ACKR2O00590 384 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 FAM189A1O60320 539 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 TRBC1P01850 177 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 HIST1H2ABP04908 130 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 IFNA6P05013 189 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 HOXD12P35452 270 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 IRF8Q02556 426 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 HIST3H2AQ7L7L0 130 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 GPR65Q8IYL9 337 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 CLIP4Q8N3C7 705 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF615Q8N8J6 731 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 STON2Q8WXE9 905 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 HIST1H2ACQ93077 130 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 RTFDC1Q9BY42 306 aaPredicted RBP8.7□□□□□ -1.02
COL6A6-201ENST00000358511 PORCNQ9H237 461 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 MMP27Q9H306 513 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 LRTM1Q9HBL6 345 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 RABL2BQ9UNT1 228 aa8.7□□□□□ -1.02
COL6A6-201ENST00000358511 SPTBP11277 2137 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF432O94892 652 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 IL7P13232 177 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 UBA1P22314 1058 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CDH13P55290 713 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 BIKQ13323 160 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZC3H12AQ5D1E8 599 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GARNL3Q5VVW2 1013 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CDCA2Q69YH5 1023 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 FAM151AQ8WW52 585 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 AKAP1Q92667 903 aaKnown RBP eCLIP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 MFSD14AQ96MC6 490 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ITPAQ9BY32 194 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SDK1Q7Z5N4 2213 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 A0A088AWK7 358 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 RP2O75695 350 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CALCAP01258 141 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 XRCC1P18887 633 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF10P21506 573 aaPredicted RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 GNPDA1P46926 289 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 OR1G1P47890 313 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ABRQ12979 859 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 DAG1Q14118 895 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 TEAD4Q15561 434 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 MFSD14CQ5VZR4 134 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 OR5K1Q8NHB7 308 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CCDC3Q9BQI4 270 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 ZBTB26Q9HCK0 441 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 C11orf16Q9NQ32 467 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 N6AMT1Q9Y5N5 214 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 LACTBL1A8MY62 500 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SH3BGRLO75368 114 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 PPP2R2BQ00005 443 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 DUS1LQ6P1R4 473 aaKnown RBP8.69□□□□□ -1.02
COL6A6-201ENST00000358511 OAFQ86UD1 273 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 CYP4X1Q8N118 509 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 MGME1Q9BQP7 344 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SEC14L3Q9UDX4 400 aa8.69□□□□□ -1.02
COL6A6-201ENST00000358511 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms