RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 OR52B6Q8NGF0 335 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 RAB2BQ8WUD1 216 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 OSCP1Q8WVF1 389 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 AGO3Q9H9G7 860 aaKnown RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 KLQ9UEF7 1012 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 SUN2Q9UH99 717 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 POU2F3Q9UKI9 436 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 A0A0G2JLL6 359 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 E9PAM4 449 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ECI2O75521 394 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 RHOBTB1O94844 696 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ALDH2P05091 517 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 HMBSP08397 361 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 OR4Q2P0C623 313 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ITGB6P18564 788 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 POLD2P49005 469 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ATP4BP51164 291 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 AIF1P55008 147 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 KCNAB2Q13303 367 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 RCAN2Q14206 197 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ALFQ53S48 1182 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 SLC16A12Q6ZSM3 486 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 KIAA0408Q6ZU52 694 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 PRRT2Q7Z6L0 340 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 PDPRQ8NCN5 879 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 GLMNQ92990 594 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 NRBF2Q96F24 287 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 ATOH8Q96SQ7 321 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 MYOCQ99972 504 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 NOL6Q9H6R4 1146 aaKnown RBP10.05□□□□□ -0.8
PTPRA-203ENST00000356147 MTRRQ9UBK8 725 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 HS3ST4Q9Y661 456 aa10.05□□□□□ -0.8
PTPRA-203ENST00000356147 MIA3Q5JRA6 1907 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 ASB14A6NK59 587 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 A6NL46 340 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 CLDN25C9JDP6 229 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 G3V2T6 193 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 BTN3A1O00481 513 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 CD3EAPO15446 510 aaKnown RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 DFNA5O60443 496 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SNX2O60749 519 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 MITFO75030 526 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SNAI1O95863 264 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 DNAJB2P25686 324 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 FMO3P31513 532 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 ALDH3A2P51648 485 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 OCA2Q04671 838 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 GALNT1Q10472 559 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 GRSF1Q12849 480 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SLC13A2Q13183 592 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 INAVAQ3KP66 663 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TXNDC11Q6PKC3 985 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 LRRTM3Q86VH5 581 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 ZDHHC13Q8IUH4 622 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 CHDHQ8NE62 594 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 GPR152Q8TDT2 470 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 HTRA1Q92743 480 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 EXOC2Q96KP1 924 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 HGH1Q9BTY7 390 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TRIM54Q9BYV2 358 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 EIF2B4Q9UI10 523 aaKnown RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 PDE10AQ9Y233 779 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TRIP12Q14669 1992 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 AGRPO00253 132 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 IRAK2O43187 625 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 AQP9O43315 295 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 LDB2O43679 373 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 JRKO75564 520 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 NADKO95544 446 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 ESRRBO95718 433 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 GLP2RO95838 553 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 G6PDP11413 515 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 DNAJB1P25685 340 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 HMGB2P26583 209 aaKnown RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SCNN1GP51170 649 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 GP2P55259 537 aaKnown RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 NCS1P62166 190 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 LCP2Q13094 533 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 ATP6AP1LQ52LC2 224 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TIGD5Q53EQ6 642 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 RAB41Q5JT25 222 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 C6orf141Q5SZD1 244 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 MARC1Q5VT66 337 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 IQSEC1Q6DN90 963 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 LAIR2Q6ISS4 152 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TAF2Q6P1X5 1199 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 MILR1Q7Z6M3 343 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TMEM179BQ7Z7N9 219 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SCN4BQ8IWT1 228 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 TMEM199Q8N511 208 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 OR10A6Q8NH74 314 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 PROKR1Q8TCW9 393 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 FKBP10Q96AY3 582 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 PGAP3Q96FM1 320 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-203ENST00000356147 SMARCD1Q96GM5 515 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 C17orf80Q9BSJ5 609 aa10.04□□□□□ -0.8
PTPRA-203ENST00000356147 THUMPD3Q9BV44 507 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms