RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 JMJD6Q6NYC1 403 aaPredicted RBP11.07□□□□□ -0.64
RTN3-204ENST00000354497 LZTR1Q8N653 840 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 SLC30A5Q8TAD4 765 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 FAM81AQ8TBF8 368 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 C17orf50Q8WW18 174 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 LZICQ8WZA0 190 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 AP2M1Q96CW1 435 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 C9orf72Q96LT7 481 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 ALS2CR12Q96Q35 445 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 RUFY1Q96T51 708 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 PARD6BQ9BYG5 372 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.07□□□□□ -0.64
RTN3-204ENST00000354497 LRRC19Q9H756 370 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 ACTR5Q9H9F9 607 aaPredicted RBP11.07□□□□□ -0.64
RTN3-204ENST00000354497 GPATCH2LQ9NWQ4 482 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 TBC1D29Q9UFV1 150 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 ITGB1BP2Q9UKP3 347 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 PADI1Q9ULC6 663 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 FZD10Q9ULW2 581 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 SLC5A6Q9Y289 635 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 ZNF451Q9Y4E5 1061 aa11.07□□□□□ -0.64
RTN3-204ENST00000354497 A0A0U1RQS6 177 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
RTN3-204ENST00000354497 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 DAPK3O43293 454 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 DPM1O60762 260 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 SPAG6O75602 509 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 MT-ND3P03897 115 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ANKRD34CP0C6C1 535 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ACP5P13686 325 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 RFC1P35251 1148 aaPredicted RBP11.06□□□□□ -0.64
RTN3-204ENST00000354497 RENBPP51606 427 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 NDST2P52849 883 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ELOAQ14241 798 aaKnown RBP11.06□□□□□ -0.64
RTN3-204ENST00000354497 ZNF235Q14590 738 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 CHRNA6Q15825 494 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ARHGAP36Q6ZRI8 547 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 RFLNAQ6ZTI6 216 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 TSPAN33Q86UF1 283 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 TTC13Q8NBP0 860 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 C3orf20Q8ND61 904 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 CENPIQ92674 756 aaPredicted RBP11.06□□□□□ -0.64
RTN3-204ENST00000354497 C19orf60Q96EN9 201 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 NSMCE3Q96MG7 304 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ING2Q9H160 280 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 NUP62CLQ9H1M0 184 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 ABCG8Q9H221 673 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 LHX9Q9NQ69 397 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 KLC4Q9NSK0 619 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 G3BP2Q9UN86 482 aaKnown RBP11.06□□□□□ -0.64
RTN3-204ENST00000354497 PCDHGA9Q9Y5G4 932 aaKnown RBP11.06□□□□□ -0.64
RTN3-204ENST00000354497 PCDHGA6Q9Y5G7 932 aa11.06□□□□□ -0.64
RTN3-204ENST00000354497 MN1Q10571 1320 aaPredicted RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 LRBAP50851 2863 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 NPIPB15A6NHN6 443 aaPredicted RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 A6NL46 340 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 SEC31AO94979 1220 aaKnown RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 SLC2A4P14672 509 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 AMD1P17707 334 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 MMP8P22894 467 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 MCM3P25205 808 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 TEAD1P28347 426 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 LEPRP48357 1165 aaKnown RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 IL11RAQ14626 422 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 LBRQ14739 615 aaKnown RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 UGT8Q16880 541 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 FAM199XQ6PEV8 388 aaPredicted RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 IYDQ6PHW0 289 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 PPP1R3BQ86XI6 285 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 TRIM48Q8IWZ4 208 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 THAP4Q8WY91 577 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 SCAMP4Q969E2 229 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 PPP1R14BQ96C90 147 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 SCARF2Q96GP6 870 aaPredicted RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 EPB41L1Q9H4G0 881 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 UTP6Q9NYH9 597 aaKnown RBP11.05□□□□□ -0.64
RTN3-204ENST00000354497 CPNE7Q9UBL6 633 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 CSMD1Q96PZ7 3565 aa11.05□□□□□ -0.64
RTN3-204ENST00000354497 A0A1W2PQ67 120 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 ANKRD62A6NC57 917 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 C21orf140B9A014 251 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 PSMD11O00231 422 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 EEF2KO00418 725 aaKnown RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 GFPT2O94808 682 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 SOD1P00441 154 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 ATP1A1P05023 1023 aaKnown RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 VARSP26640 1264 aaKnown RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 GRNP28799 593 aaKnown RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 RPS15P62841 145 aaKnown RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 CDK18Q07002 472 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 NSUN2Q08J23 767 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTN3-204ENST00000354497 IL10RAQ13651 578 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 RFTN1Q14699 578 aaPredicted RBP11.04□□□□□ -0.64
RTN3-204ENST00000354497 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
RTN3-204ENST00000354497 FBXW10Q5XX13 1052 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms