RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 KDM1BQ8NB78 822 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 LPCAT1Q8NF37 534 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CHPT1Q8WUD6 406 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CENPIQ92674 756 aaPredicted RBP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 MUC13Q9H3R2 512 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 SLC38A7Q9NVC3 462 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 C14orf119Q9NWQ9 140 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 MAGED1Q9Y5V3 778 aaPredicted RBP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 NPEPPSL1A6NEC2 478 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 TSPAN4O14817 238 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 RGS14O43566 566 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 RFPL2O75678 378 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 SERPINF2P08697 491 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 SLC35E2BP0CK96 405 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 COL6A1P12109 1028 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 BDNFP23560 247 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 LMO2P25791 158 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 RFC2P35250 354 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 ALDH3B2P48448 385 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 FKBP1AP62942 108 aaKnown RBP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CYP4F8P98187 520 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 EN1Q05925 392 aaPredicted RBP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CXCL9Q07325 125 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 LCP2Q13094 533 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CPSF6Q16630 551 aaKnown RBP eCLIP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 SYCE2Q6PIF2 218 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 ACVR1CQ8NER5 493 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CDK15Q96Q40 435 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 HAPLN2Q9GZV7 340 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 FZD10Q9ULW2 581 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 NFASCO94856 1347 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 OR6C70A6NIJ9 312 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 SNX4O95219 450 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 NUDT6P53370 316 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 GALNT3Q14435 633 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 TMEM132BQ14DG7 1078 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 FAM187BQ17R55 369 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CYP2U1Q7Z449 544 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 SPATA19Q7Z5L4 167 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 DSG4Q86SJ6 1040 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 CEP97Q8IW35 865 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 OR52J3Q8NH60 311 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 ZUFSPQ96AP4 578 aa14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 PAQR5Q9NXK6 330 aaPredicted RBP14.11□□□□□ -0.15
DNMT3B-204ENST00000353855 PHRF1Q9P1Y6 1649 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 M0QX08 132 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 WNT10BO00744 389 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 PSIP1O75475 530 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 POLR2EP19388 210 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 GLUD2P49448 558 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 FPGSQ05932 587 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 GRM1Q13255 1194 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 TSNQ15631 228 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 PPP2R2DQ66LE6 453 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 BBS7Q8IWZ6 715 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 CINPQ9BW66 212 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 CLPBQ9H078 707 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 RCOR3Q9P2K3 495 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 HMX2A2RU54 273 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 CASTOR2A6NHX0 329 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 NOS1APO75052 506 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 FYNP06241 537 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 DPEP1P16444 411 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 IMPDH1P20839 514 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SF3B4Q15427 424 aaKnown RBP eCLIP14.1□□□□□ -0.153e-6■■■■□ 22.8
DNMT3B-204ENST00000353855 ZSWIM7Q19AV6 140 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SLC10A6Q3KNW5 377 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 C10orf120Q5SQS8 335 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 APOBEC3FQ8IUX4 373 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SNX27Q96L92 541 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 TUBA1CQ9BQE3 449 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 BPIFA1Q9NP55 256 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 NMRK2Q9NPI5 230 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 ERVK-18Q9QC07 812 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 HACL1Q9UJ83 578 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 ULK1O75385 1050 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SERPINA1P01009 418 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 KRT6AP02538 564 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SLC15A1P46059 708 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 GMPSP49915 693 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 TUBB3Q13509 450 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 ZNF484Q5JVG2 852 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 CES4AQ5XG92 561 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 ZDHHC21Q8IVQ6 265 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 ELMOD2Q8IZ81 293 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 GRPEL2Q8TAA5 225 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 COLEC11Q9BWP8 271 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 TDRD1Q9BXT4 1180 aaKnown RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 TRIM45Q9H8W5 580 aaPredicted RBP14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SIX4Q9UIU6 781 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 CRLS1Q9UJA2 301 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 ZNF222Q9UK12 451 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 PEX16Q9Y5Y5 336 aa14.1□□□□□ -0.15
DNMT3B-204ENST00000353855 SLIT2O94813 1529 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms