RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF404Q494X3 552 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF789Q5FWF6 425 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TPRG1LQ5T0D9 272 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 XRRA1Q6P2D8 792 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 PROSER1Q86XN7 944 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SLC22A15Q8IZD6 547 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CADM2Q8N3J6 435 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SLC35F5Q8WV83 523 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TRIB2Q92519 343 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TRIM63Q969Q1 353 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 DPEP3Q9H4B8 488 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 GSTO2Q9H4Y5 243 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FBXO8Q9NRD0 319 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 C14orf119Q9NWQ9 140 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 LEF1Q9UJU2 399 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 PCDHA9Q9Y5H5 950 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 MAFBQ9Y5Q3 323 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SNX10Q9Y5X0 201 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TRPM7Q96QT4 1865 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CITO14578 2027 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 A0A1W2PP18 115 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TCRBV5S2A0A599 114 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NCF1BA6NI72 391 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ERI2A8K979 691 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NCF1CA8MVU1 366 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 EVPLLA8MZ36 301 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FAM72CH0Y354 149 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CNTN5O94779 1100 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CAPN1P07384 714 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NCF1P14598 390 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 IMPDH1P20839 514 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 POU4F1Q01851 419 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CLCA4Q14CN2 919 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ATAD3CQ5T2N8 411 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FAM72AQ5TYM5 149 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 RAP1GAP2Q684P5 730 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FAAH2Q6GMR7 532 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SIGIRRQ6IA17 410 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FAM72DQ6L9T8 149 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF544Q6NX49 715 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 C8orf82Q6P1X6 216 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FAM72BQ86X60 149 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 EID3Q8N140 333 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 METTL4Q8N3J2 472 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 DCBLD1Q8N8Z6 715 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 GOLM1Q8NBJ4 401 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 OR10Q1Q8NGQ4 319 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 LPAR1Q92633 364 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NSUN5Q96P11 429 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 MRIQ9BWK5 157 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 BEX2Q9BXY8 128 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 AMBRA1Q9C0C7 1298 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SMOC2Q9H3U7 446 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ZBTB20Q9HC78 741 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 WDR6Q9NNW5 1121 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TLR9Q9NR96 1032 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 PLSCR3Q9NRY6 295 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 IGSF5Q9NSI5 407 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 USE1Q9NZ43 259 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 STMN3Q9NZ72 180 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 INTS6Q9UL03 887 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 STAP1Q9ULZ2 295 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SNX8Q9Y5X2 465 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 MTSS1O43312 755 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SLC22A3O75751 556 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CYP7B1O75881 506 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 C1RP00736 705 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 MT-ND2P03891 347 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 IFI30P13284 250 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF181Q2M3W8 571 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SPANXN2Q5MJ10 180 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 BLOC1S3Q6QNY0 202 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 AHSA2Q719I0 299 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 LRRC8DQ7L1W4 858 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 DYNC2LI1Q8TCX1 351 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 PHF10Q8WUB8 498 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ANKRD49Q8WVL7 239 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TSPAN17Q96FV3 270 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 RBM4BQ9BQ04 359 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 TBL1YQ9BQ87 522 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 RBM4Q9BWF3 364 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 BBS2Q9BXC9 721 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 UGT2B28Q9BY64 529 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SIK2Q9H0K1 926 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 FAM49AQ9H0Q0 323 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 MUC13Q9H3R2 512 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 NTN4Q9HB63 628 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 CCDC177Q9NQR7 707 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ADGRE2Q9UHX3 823 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 OAS3Q9Y6K5 1087 aaKnown RBP7.57□□□□□ -1.2
BRCA1-201ENST00000352993 SHROOM3Q8TF72 1996 aa7.57□□□□□ -1.2
BRCA1-201ENST00000352993 ZNF487B1APH4 448 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 SUPT3HB4E1H0 165 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 PRMT5O14744 637 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-201ENST00000352993 RGS13O14921 159 aa7.56□□□□□ -1.2
BRCA1-201ENST00000352993 AREL1O15033 823 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms