RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TMEM214Q6NUQ4 689 aaKnown RBP14.62□□□□□ -0.07
NUP50-201ENST00000347635 SLC44A2Q8IWA5 706 aaPredicted RBP14.62□□□□□ -0.07
NUP50-201ENST00000347635 RAB2BQ8WUD1 216 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 LRRC58Q96CX6 371 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 ZNF696Q9H7X3 374 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 COQ6Q9Y2Z9 468 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 U3KQV3 271 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 ZNF37AP17032 561 aaPredicted RBP14.62□□□□□ -0.07
NUP50-201ENST00000347635 OOSP2Q86WS3 158 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 DYRK1BQ9Y463 629 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 ASB3Q9Y575 518 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 BCKDKO14874 412 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 CLDN11O75508 207 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 ARL4DP49703 201 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 DNAJB13P59910 316 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 TMC5Q6UXY8 1006 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 KBTBD6Q86V97 674 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 POC5Q8NA72 575 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 C11orf84Q9BUA3 381 aaPredicted RBP14.62□□□□□ -0.07
NUP50-201ENST00000347635 GDAP2Q9NXN4 497 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 H2AFY2Q9P0M6 372 aaPredicted RBP14.62□□□□□ -0.07
NUP50-201ENST00000347635 IKZF3Q9UKT9 509 aa14.62□□□□□ -0.07
NUP50-201ENST00000347635 SNTNA6NMZ2 147 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 HPCAL1P37235 193 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 RAB15P59190 212 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 CTC1Q2NKJ3 1217 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 FNDC3BQ53EP0 1204 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 DENND1CQ8IV53 801 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 DRAXINQ8NBI3 349 aaPredicted RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 HAPLN3Q96S86 360 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 RERGLQ9H628 205 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 SAMHD1Q9Y3Z3 626 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 NDST3O95803 873 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 TSNQ15631 228 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 MYLK3Q32MK0 819 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 ADCK2Q7Z695 626 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 GPR180Q86V85 440 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 HIPK1Q86Z02 1210 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 C7orf61Q8IZ16 206 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 SVOPLQ8N434 492 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 TFB2MQ9H5Q4 396 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 NUDT4Q9NZJ9 180 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 PDE10AQ9Y233 779 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 ELOVL7A1L3X0 281 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 SYNDIG1LA6NDD5 238 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 HTRA2O43464 458 aaPredicted RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 ADH1CP00326 375 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 GABRR2P28476 465 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 WEE1P30291 646 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 TAF10Q12962 218 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 SGCGQ13326 291 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 CEACAM7Q14002 265 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 TIMM50Q3ZCQ8 353 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 NAPRTQ6XQN6 538 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 KRT73Q86Y46 540 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 KBTBD8Q8NFY9 601 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 SAMD4AQ9UPU9 718 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 IGKV6D-21A0A0A0MT36 114 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 A0A1W2PQ45 241 aaPredicted RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 A0A1W2PQY0 241 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 OGNP20774 298 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 IDH2P48735 452 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 CCR3P51677 355 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 NRG1Q02297 640 aaPredicted RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 ACSM2AQ08AH3 577 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 NCF4Q15080 339 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 RBM20Q5T481 1227 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 ACSM2BQ68CK6 577 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 TRIM48Q8IWZ4 208 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 OR9I1Q8NGQ6 314 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 HPS1Q92902 700 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 FEM1CQ96JP0 617 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 OSBPL2Q9H1P3 480 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 KRT84Q9NSB2 600 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
NUP50-201ENST00000347635 PTBP2Q9UKA9 531 aaKnown RBP14.61□□□□□ -0.07
NUP50-201ENST00000347635 MYOCOSA0A1B0GUC4 107 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 FADS2O95864 444 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 RAP2AP10114 183 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 IGFBP4P22692 258 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 CLCN2P51788 898 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 ZNF423Q2M1K9 1284 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 OTOP2Q7RTS6 562 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 ZFYVE19Q96K21 471 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 MFSD1Q9H3U5 465 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 LIN28AQ9H9Z2 209 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 RFXANKO14593 260 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 SORBS2O94875 1100 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 OR4F21O95013 312 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 DBTP11182 482 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 IGFBP5P24593 272 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 EEFSECP57772 596 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 FOXM1Q08050 763 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 ZCCHC8Q6NZY4 707 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 GALNT5Q7Z7M9 940 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 C11orf74Q86VG3 221 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 HSPBAP1Q96EW2 488 aa14.6□□□□□ -0.07
NUP50-201ENST00000347635 YTHDF1Q9BYJ9 559 aaKnown RBP14.6□□□□□ -0.07
NUP50-201ENST00000347635 SLC7A5P2Q9GIP4 190 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms