RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 HACD3Q9P035 362 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 GALPQ9UBC7 116 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 GPN3Q9UHW5 284 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 CORO1CQ9ULV4 474 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 FAM50BQ9Y247 325 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 HS3ST2Q9Y278 367 aa9.17□□□□□ -0.94
ATG4A-202ENST00000345734 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 NUP210Q8TEM1 1887 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-202ENST00000345734 EME2A4GXA9 379 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 A8MT66 165 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ATP5HO75947 161 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SRP72O76094 671 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 RHOBTB1O94844 696 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CLDN7O95471 211 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CD1DP15813 335 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ALOX15P16050 662 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TFEBP19484 476 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ATP5F1P24539 256 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SUOXP51687 545 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ELF3P78545 371 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ACAP2Q15057 778 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 MYLK3Q32MK0 819 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ACCSLQ4AC99 568 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TMEM215Q68D42 235 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 KLC3Q6P597 504 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TLDC1Q6P9B6 456 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TMC5Q6UXY8 1006 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ISCA2Q86U28 154 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ADIPOR2Q86V24 386 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ADGRG2Q8IZP9 1017 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 LEMD2Q8NC56 503 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ST13P5Q8NFI4 369 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 MAPK15Q8TD08 544 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 RSPRY1Q96DX4 576 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TMEM74Q96NL1 305 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 BIRC8Q96P09 236 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SIKE1Q9BRV8 207 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 LRMDAQ9H2I8 198 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 COG4Q9H9E3 785 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 PIDD1Q9HB75 910 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ZDHHC7Q9NXF8 308 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 DNAJB12Q9NXW2 375 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 LMCD1Q9NZU5 365 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ZDHHC2Q9UIJ5 367 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 PKP3Q9Y446 797 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF106Q9H2Y7 1883 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 A0A096LPE4 126 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 C1orf232A0A0U1RR37 186 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CAPN14A8MX76 684 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 H3BMM5 538 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 H7C0S8 307 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 GAPDHSO14556 408 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 DIAPH2O60879 1101 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SOCS5O75159 536 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 RBP1P09455 135 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF37AP17032 561 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 HMGCLP35914 325 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 PRKAA2P54646 552 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ERVK-21P61565 698 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ECT2LQ008S8 904 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 OR4D1Q15615 310 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CDKN3Q16667 212 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SLC9B1Q4ZJI4 515 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CTSL3PQ5NE16 218 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TRIM68Q6AZZ1 485 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CYB5D1Q6P9G0 228 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 PAQR3Q6TCH7 311 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 FAM151BQ6UXP7 276 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 DPY19L3Q6ZPD9 716 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TAS2R42Q7RTR8 314 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TSPAN33Q86UF1 283 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CHST14Q8NCH0 376 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 CYB5D2Q8WUJ1 264 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 NAT14Q8WUY8 206 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SORCS1Q8WY21 1168 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SMG7Q92540 1137 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 EXT2Q93063 718 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 UTP4Q969X6 686 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 NXPE3Q969Y0 559 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 PHF21BQ96EK2 531 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 DTNBP1Q96EV8 351 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 NSL1Q96IY1 281 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 RSRC1Q96IZ7 334 aaKnown RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 PPP1R36Q96LQ0 422 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ILKAPQ9H0C8 392 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-202ENST00000345734 ZFYVE1Q9HBF4 777 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 DNAJC28Q9NX36 388 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 TBC1D14Q9P2M4 693 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 SLC25A13Q9UJS0 675 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 IKZF3Q9UKT9 509 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 RAP2CQ9Y3L5 183 aa9.16□□□□□ -0.94
ATG4A-202ENST00000345734 A8MUI8 341 aa9.15□□□□□ -0.94
ATG4A-202ENST00000345734 ZNF197O14709 1029 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms