RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 EID2BQ96D98 161 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 RBM41Q96IZ5 413 aaKnown RBP12.26□□□□□ -0.45
SGCA-202ENST00000344627 SRPK1Q96SB4 655 aaKnown RBP12.26□□□□□ -0.45
SGCA-202ENST00000344627 UCK1Q9HA47 277 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 TRIM39Q9HCM9 518 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 ANAPC2Q9UJX6 822 aa12.26□□□□□ -0.45
SGCA-202ENST00000344627 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 AURKAO14965 403 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 TOX3O15405 576 aaPredicted RBP12.25□□□□□ -0.45
SGCA-202ENST00000344627 RAD1O60671 282 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 MTX2O75431 263 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 BPIP17213 487 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 CSF2RBP32927 897 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 MC2RQ01718 297 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 WASHC5Q12768 1159 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 SRSF6Q13247 344 aaKnown RBP12.25□□□□□ -0.45
SGCA-202ENST00000344627 NOMO1Q15155 1222 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 SEPT7Q16181 437 aaKnown RBP12.25□□□□□ -0.45
SGCA-202ENST00000344627 TAZQ16635 292 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
SGCA-202ENST00000344627 PDPK2PQ6A1A2 396 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 IYDQ6PHW0 289 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 ADGRG6Q86SQ4 1221 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 VASH2Q86V25 355 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 KATNAL2Q8IYT4 538 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 NLGN4XQ8N0W4 816 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 TRAM1L1Q8N609 369 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 IPMKQ8NFU5 416 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 NLGN4YQ8NFZ3 816 aaPredicted RBP12.25□□□□□ -0.45
SGCA-202ENST00000344627 ART4Q93070 314 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 PRDM8Q9NQV8 689 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 TMEM9Q9P0T7 183 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 CPNE7Q9UBL6 633 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 KLHL3Q9UH77 587 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 DNAJC16Q9Y2G8 782 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 SPO11Q9Y5K1 396 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 PIEZO2Q9H5I5 2752 aa12.25□□□□□ -0.45
SGCA-202ENST00000344627 SETXQ7Z333 2677 aaKnown RBP12.24□□□□□ -0.45
SGCA-202ENST00000344627 hCG_1818297A0A087WSY0 165 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 EFCAB7A8K855 629 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 PDZK1P1A8MUH7 402 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 HACD1B0YJ81 288 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 KMOO15229 486 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 CDK14O94921 469 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 RECKO95980 971 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 ANKRD34CP0C6C1 535 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 F3P13726 295 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 CTNNA2P26232 953 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 CD68P34810 354 aaPredicted RBP12.24□□□□□ -0.45
SGCA-202ENST00000344627 CHRNA4P43681 627 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 MARCKSL1P49006 195 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 HADHBP55084 474 aaKnown RBP12.24□□□□□ -0.45
SGCA-202ENST00000344627 DCDC1P59894 354 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 KCNAB2Q13303 367 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 GTF2H3Q13889 308 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 SLC14A2Q15849 920 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 SIRPB2Q5JXA9 342 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 ARHGAP22Q7Z5H3 698 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 LRRTM4Q86VH4 590 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 RBM12BQ8IXT5 1001 aaKnown RBP12.24□□□□□ -0.45
SGCA-202ENST00000344627 ZNF567Q8N184 647 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 BLOC1S5Q8TDH9 187 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 HTR3CQ8WXA8 447 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 KRT35Q92764 455 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 TADA1Q96BN2 335 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 TTC25Q96NG3 672 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 FERMT1Q9BQL6 677 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 TBC1D10AQ9BXI6 508 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 TRIM10Q9UDY6 481 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 RSPH14Q9UHP6 348 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 PILRAQ9UKJ1 303 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 TMEM184BQ9Y519 407 aaPredicted RBP12.24□□□□□ -0.45
SGCA-202ENST00000344627 B3GALT1Q9Y5Z6 326 aa12.24□□□□□ -0.45
SGCA-202ENST00000344627 EPN1Q9Y6I3 576 aaPredicted RBP12.24□□□□□ -0.45
SGCA-202ENST00000344627 SDK2Q58EX2 2172 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 LILRA5A6NI73 299 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 SOWAHDA6NJG2 315 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 BUD23O43709 281 aaKnown RBP12.23□□□□□ -0.45
SGCA-202ENST00000344627 VEGFDO43915 354 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 LCA5LO95447 670 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 VIPP01282 170 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 PTMAP06454 111 aaKnown RBP12.23□□□□□ -0.45
SGCA-202ENST00000344627 ZNF7P17097 686 aaPredicted RBP12.23□□□□□ -0.45
SGCA-202ENST00000344627 CETN2P41208 172 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 ZNF75DP51815 510 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 SEPT6Q14141 434 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 C11orf63Q6NUN7 778 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 KDELC1Q6UW63 502 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 FAM151BQ6UXP7 276 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 GLT6D1Q7Z4J2 308 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 TRAPPC5Q8IUR0 188 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 ESX1Q8N693 406 aa12.23□□□□□ -0.45
SGCA-202ENST00000344627 BMPERQ8N8U9 685 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms