RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 CAPNS1P04632 268 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 CYBBP04839 570 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 ZNF26P17031 533 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-201ENST00000343916 CLCN4P51793 760 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 CLCN7P51798 805 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 MTX3Q5HYI7 312 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 SLC15A3Q8IY34 581 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 CANT1Q8WVQ1 401 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 TRMT2BQ96GJ1 504 aaKnown RBP19.16■□□□□ 0.66
COL9A3-201ENST00000343916 BOCQ9BWV1 1114 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 OR51B4Q9Y5P0 310 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 MICAL3Q7RTP6 2002 aa19.16■□□□□ 0.66
COL9A3-201ENST00000343916 H7C0S8 307 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 BAIAP3O94812 1187 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 IDO1P14902 403 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 SOX11P35716 441 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 PTGER3P43115 390 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 RPL26P61254 145 aaKnown RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 ZNF784Q8NCA9 323 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 RNF217Q8TC41 542 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 ZNF296Q8WUU4 475 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 Q9H521 79 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 COQ10BQ9H8M1 238 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 SLC52A3Q9NQ40 469 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 STOML2Q9UJZ1 356 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 SLC30A1Q9Y6M5 507 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 A8MX80 341 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 GREM1O60565 184 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 TIPRLO75663 272 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 MATN4O95460 622 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 HMGCLP35914 325 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 DYNC1I2Q13409 638 aaKnown RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 INO80DQ53TQ3 878 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 TPGS2Q68CL5 300 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 HMBOX1Q6NT76 420 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 BLOC1S3Q6QNY0 202 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 PPWD1Q96BP3 646 aaKnown RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 ALG14Q96F25 216 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 TMEM169Q96HH4 297 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 C1QTNF3Q9BXJ4 246 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 P2RY12Q9H244 342 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 NOL11Q9H8H0 719 aaKnown RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 CMTM6Q9NX76 183 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 EVLQ9UI08 416 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 CNOT6Q9ULM6 557 aaKnown RBP19.15■□□□□ 0.66
COL9A3-201ENST00000343916 CPQQ9Y646 472 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 PDE4DIPQ5VU43 2346 aa19.15■□□□□ 0.66
COL9A3-201ENST00000343916 C7orf72A4D263 438 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 GIPC1O14908 333 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 MLYCDO95822 493 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 ESR1P03372 595 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 PRR35P0CG20 571 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 UROSP10746 265 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 SLC6A2P23975 617 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 SLC7A1P30825 629 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 UFM1P61960 85 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 AARS2Q5JTZ9 985 aaKnown RBP19.14■□□□□ 0.66
COL9A3-201ENST00000343916 TXNDC11Q6PKC3 985 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 SATL1Q86VE3 508 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 PAF1Q8N7H5 531 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 DNAJB14Q8TBM8 379 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 LRRC58Q96CX6 371 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 MYO19Q96H55 970 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 CIB1Q99828 191 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 ABCD2Q9UBJ2 740 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 CLEC4EQ9ULY5 219 aa19.14■□□□□ 0.66
COL9A3-201ENST00000343916 PRAMEF1O95521 474 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 CACNG1Q06432 222 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 XKR7Q5GH72 579 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 ARMC12Q5T9G4 340 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 LETMD1Q6P1Q0 360 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 IYDQ6PHW0 289 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 GPRIN3Q6ZVF9 776 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 SPPL2CQ8IUH8 684 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 CLDN19Q8N6F1 224 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 OR56A4Q8NGH8 313 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 PIH1D2Q8WWB5 315 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 NCSTNQ92542 709 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 CIPCQ9C0C6 399 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 HACD3Q9P035 362 aa19.14■□□□□ 0.65
COL9A3-201ENST00000343916 ASPDHA6ND91 283 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 PRMT5O14744 637 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 OR6B1O95007 311 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 PGLSO95336 258 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 CHEK2O96017 543 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 SMIM18P0DKX4 95 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 ERVPABLB-1P60509 514 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 SEMG2Q02383 582 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 HABP4Q5JVS0 413 aaKnown RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 OGFOD2Q6N063 350 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 HJURPQ8NCD3 748 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 PBXIP1Q96AQ6 731 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 SLC29A1Q99808 456 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 HOPXQ9BPY8 73 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 SLAMF8Q9P0V8 285 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 AURKCQ9UQB9 309 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 TYW5A2RUC4 315 aaKnown RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 GNRH1P01148 92 aa19.13■□□□□ 0.65
COL9A3-201ENST00000343916 HSPA8P11142 646 aaKnown RBP19.13■□□□□ 0.65
COL9A3-201ENST00000343916 CASP2P42575 452 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms