RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 KIF5AQ12840 1032 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SNTA1Q13424 505 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TCEAL1Q15170 157 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SKIDA1Q1XH10 827 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 KRTAP24-1Q3LI83 254 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TUBB8Q3ZCM7 444 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CYP27C1Q4G0S4 372 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 RABGAP1LQ5R372 815 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 VAX1Q5SQQ9 334 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PLEKHS1Q5SXH7 462 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 LIPNQ5VXI9 398 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DIEXFQ68CQ4 756 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PLAG1Q6DJT9 500 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 FOXR1Q6PIV2 292 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 DTHD1Q6ZMT9 781 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 Q6ZVU0 165 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NOL8Q76FK4 1167 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ENOSF1Q7L5Y1 443 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PRICKLE2Q7Z3G6 844 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TMCO2Q7Z6W1 182 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 MRGPREQ86SM8 312 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SDCCAG8Q86SQ7 713 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TMPRSS6Q8IU80 811 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SPPL2CQ8IUH8 684 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 GLB1L2Q8IW92 636 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SULF2Q8IWU5 870 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF654Q8IZM8 581 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TEX26Q8N6G2 289 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 EID2Q8N6I1 236 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 C4orf32Q8N8J7 132 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM178AQ8NBL3 297 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PRR7Q8TB68 274 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CT55Q8WUE5 264 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SDR42E1Q8WUS8 393 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ASZ1Q8WWH4 475 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CFHR4Q92496 578 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 BHMTQ93088 406 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF501Q96CX3 271 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 SNRNP40Q96DI7 357 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF668Q96K58 619 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 IMMP1LQ96LU5 166 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 OR1F2PQ96R84 312 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PSMB7Q99436 277 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NPLQ9BXD5 320 aaPredicted RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 AP1M1Q9BXS5 423 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 MAGEH1Q9H213 219 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 EPS8L2Q9H6S3 715 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 EBF2Q9HAK2 575 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 IL1RL2Q9HB29 575 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 FANCEQ9HB96 536 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PLCB1Q9NQ66 1216 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 EIF2B3Q9NR50 452 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NECAP2Q9NVZ3 263 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TAS2R16Q9NYV7 291 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 KLF15Q9UIH9 416 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 AMFRQ9UKV5 643 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 CBLCQ9ULV8 474 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PPT2Q9UMR5 302 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 PCDHGC3Q9UN70 934 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 HS3ST4Q9Y661 456 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NOTCH3Q9UM47 2321 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 IGSF10Q6WRI0 2623 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 NBEAL1Q6ZS30 2694 aa1.52□□□□□ -2.17
LINC00643-201ENST00000334389 TDRD6O60522 2096 aaKnown RBP1.52□□□□□ -2.17
LINC00643-201ENST00000334389 OR6C76A6NM76 312 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ESPNB1AK53 854 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 F8W8V4 182 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 H0YIG0 161 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 QSOX1O00391 747 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 BRI3O95415 125 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 EPPINO95925 133 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM49P0CI25 452 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM49CP0CI26 452 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 UNGP13051 313 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM27P14373 513 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TCF4P15884 667 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FAHP16930 419 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MCM5P33992 734 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 AP1S1P61966 158 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GCNT1Q02742 428 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 DBPQ10586 325 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PTK6Q13882 451 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 E2F2Q14209 437 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 POM121L1PQ3SYA9 428 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CT47A1Q5JQC4 288 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PITRM1Q5JRX3 1037 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 LRCH2Q5VUJ6 765 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NADSYN1Q6IA69 706 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 LRFN4Q6PJG9 635 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 NDUFAF7Q7L592 441 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PPP1R32Q7Z5V6 425 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 DIS3L2Q8IYB7 885 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 LINC00528Q8N1L1 170 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 THOC3Q96J01 351 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 BTN2A3PQ96KV6 586 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FCRL2Q96LA5 508 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 GPATCH1Q9BRR8 931 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SPON2Q9BUD6 331 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TRAF4Q9BUZ4 470 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FSD1LQ9BXM9 530 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms