RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 C14orf28Q4W4Y0 310 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CASP12Q6UXS9 341 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 DET1Q7L5Y6 550 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC9B2Q86UD5 537 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 MRPL41Q8IXM3 137 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF567Q8N184 647 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF808Q8N4W9 903 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FNDC8Q8TC99 324 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 STK35Q8TDR2 534 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 AUTS2Q8WXX7 1259 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLITRK1Q96PX8 696 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SIRPGQ9P1W8 387 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDHA4Q9UN74 947 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 KIAA0232Q92628 1395 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 BRINP1O60477 761 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PAPSS2O95340 614 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 PGRP06401 933 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GALK1P51570 392 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 GBX2P52951 348 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 POU2AF1Q16633 256 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 C11orf91Q3C1V1 193 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 METTL11BQ5VVY1 283 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 CRTC3Q6UUV7 619 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 HIST2H3AQ71DI3 136 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM109AQ8N4B1 249 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ESX1Q8N693 406 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM47BQ8NA70 645 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR6B3Q8NGW1 331 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ANKS1AQ92625 1134 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 ASB2Q96Q27 587 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 POTEKPQ9BYX7 375 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 NELFAQ9H3P2 528 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 RRAGCQ9HB90 399 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLCO1B1Q9Y6L6 691 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 DNAJC13O75165 2243 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 METP08581 1390 aa6.03□□□□□ -1.44
CDC42BPA-201ENST00000334218 VPS26AO75436 327 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ANXA3P12429 323 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GALP22466 123 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 KDSRQ06136 332 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 FAM160B1Q5W0V3 765 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SERPINB11Q96P15 392 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DNTTIP1Q9H147 329 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 BCO1Q9HAY6 547 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 KCNIP2Q9NS61 270 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TRPS1Q9UHF7 1281 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ITGA11Q9UKX5 1188 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MGAT4DA6NG13 374 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TP73O15350 636 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DGKIO75912 1065 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PAK4O96013 591 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ITPKBP27987 946 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GAS6Q14393 721 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 FNBP1LQ5T0N5 605 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC16A9Q7RTY1 509 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF605Q86T29 641 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC41A1Q8IVJ1 513 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TIFAQ96CG3 184 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 BSCL2Q96G97 398 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 TRMT2BQ96GJ1 504 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZNF578Q96N58 590 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 RNF121Q9H920 327 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC52A2Q9HAB3 445 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CLN6Q9NWW5 311 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 REREQ9P2R6 1566 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DOCK10Q96BY6 2186 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MOXD2PA6NHM9 499 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PRMT5O14744 637 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 HRGP04196 525 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 HSF1Q00613 529 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ALG11Q2TAA5 492 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 LDLRAP1Q5SW96 308 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 C22orf42Q6IC83 251 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 EPHX4Q8IUS5 362 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 SLC44A3Q8N4M1 653 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 PIGBQ92521 554 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 DCUN1D1Q96GG9 259 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 HEXIM2Q96MH2 286 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 RAB11FIP5Q9BXF6 653 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 FAM117AQ9C073 453 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 POLD4Q9HCU8 107 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 NINJ2Q9NZG7 142 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MINPP1Q9UNW1 487 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ATP7BP35670 1465 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 AATKQ6ZMQ8 1374 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 USP17L4A6NCW7 530 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GLRA3O75311 464 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CILPO75339 1184 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 APOA2P02652 100 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 USP17L8P0C7I0 530 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GNA15P30679 374 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 RENBPP51606 427 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 CREMQ03060 361 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 AIMP2Q13155 320 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 MOGQ16653 247 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 GALNT17Q6IS24 598 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 EFCAB12Q6NXP0 572 aa6.02□□□□□ -1.45
CDC42BPA-201ENST00000334218 ZFP82Q8N141 532 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms