RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 KLF2Q9Y5W3 355 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ACTL7AQ9Y615 435 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 H3BQ06 376 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 HNRNPDLO14979 420 aaKnown RBP11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SSX5O60225 188 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 LRCH4O75427 683 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ADORA3P0DMS8 318 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SELLP14151 372 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 NPR3P17342 541 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 AGXTP21549 392 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 IL1R2P27930 398 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 TPMTP51580 245 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 UBXN2AP68543 259 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 EPS8Q12929 822 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 MEP1AQ16819 746 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 ZBTB37Q5TC79 503 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 PRSS48Q7RTY5 328 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 MICALL2Q8IY33 904 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 STON2Q8WXE9 905 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 NUAK2Q9H093 628 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SMOC2Q9H3U7 446 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 KCNH7Q9NS40 1196 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 TBC1D13Q9NVG8 400 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 CD274Q9NZQ7 290 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 SLC17A6Q9P2U8 582 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 COPS3Q9UNS2 423 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 PCDHB3Q9Y5E6 796 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 PCDHGB6Q9Y5F9 930 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 HSPE1-MOB4S4R3N1 261 aa11.76□□□□□ -0.53
SHMT2-201ENST00000328923 TP53BP1Q12888 1972 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 MICAL3Q7RTP6 2002 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 CCDC154A6NI56 674 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 H0YCG3 227 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 AGRPO00253 132 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TPP1O14773 563 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 MT-ND1P03886 318 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 C2P06681 752 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 CHRNGP07510 517 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 PSMA2P25787 234 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 MAGEA3P43357 314 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 CCR10P46092 362 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 GMPSP49915 693 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 AKR1D1P51857 326 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 DGCR6Q14129 220 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 GPR68Q15743 365 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF404Q494X3 552 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TPRG1LQ5T0D9 272 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 OTUD3Q5T2D3 398 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 C16orf62Q7Z3J2 963 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 RFX6Q8HWS3 928 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 OR8H1Q8NGG4 311 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 ASB12Q8WXK4 309 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 PMM1Q92871 262 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 FOPNLQ96NB1 174 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TMEM181Q9P2C4 612 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 GTF2IRD1Q9UHL9 959 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 MFHAS1Q9Y4C4 1052 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 HSPB11Q9Y547 144 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 HRH3Q9Y5N1 445 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 AUP1Q9Y679 476 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 SLC15A5A6NIM6 579 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 ALDOAP04075 364 aaKnown RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 ACADMP11310 421 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 MTHFD1P11586 935 aaKnown RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TNNI1P19237 187 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 BNC1Q01954 994 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 RUNX1T1Q06455 604 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 AANATQ16613 207 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 PPM1JQ5JR12 505 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 GLRA4Q5JXX5 417 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 IRAK1BP1Q5VVH5 260 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 THAP5Q7Z6K1 395 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 KIF18BQ86Y91 864 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 YIPF6Q96EC8 236 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 RADILQ96JH8 1075 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 BCL7BQ9BQE9 202 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TINAGL1Q9GZM7 467 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 RRAGCQ9HB90 399 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 AGO4Q9HCK5 861 aaKnown RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 HPS4Q9NQG7 708 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 SLC39A1Q9NY26 324 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 TINAGQ9UJW2 476 aa11.75□□□□□ -0.53
SHMT2-201ENST00000328923 RPH3AQ9Y2J0 694 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-201ENST00000328923 NFIBO00712 420 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 GREM1O60565 184 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 IL10P22301 178 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 DNAJB1P25685 340 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 MAP2K4P45985 399 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms