RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 ABCG4Q9H172 646 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 UNC93B1Q9H1C4 597 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 DDX18Q9NVP1 670 aaKnown RBP13.22□□□□□ -0.29
TRAK1-201ENST00000327628 COPS7AQ9UBW8 275 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 DHRS7Q9Y394 339 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 SPTLC1O15269 473 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 PRODHO43272 600 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 CYB5AP00167 134 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 ITGB5P18084 799 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 RFC2P35250 354 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 RPIAP49247 311 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 TAF10Q12962 218 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 CNSTQ6PJW8 725 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 SMG7Q92540 1137 aaKnown RBP13.22□□□□□ -0.29
TRAK1-201ENST00000327628 HAPLN3Q96S86 360 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 NDNQ99608 321 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 CHKBQ9Y259 395 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 PCDHGB5Q9Y5G0 923 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 TOP3BO95985 862 aaKnown RBP13.22□□□□□ -0.29
TRAK1-201ENST00000327628 HCAR3P49019 387 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 CAP1Q01518 475 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 ZNF155Q12901 538 aaPredicted RBP13.22□□□□□ -0.29
TRAK1-201ENST00000327628 CPSF6Q16630 551 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAK1-201ENST00000327628 GPR156Q8NFN8 814 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
TRAK1-201ENST00000327628 RAD51AP1Q96B01 352 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 ZBTB10Q96DT7 871 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 CFL2Q9Y281 166 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 AP4B1Q9Y6B7 739 aa13.22□□□□□ -0.29
TRAK1-201ENST00000327628 FPGTO14772 594 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 SCN2BO60939 215 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 TAS2R50P59544 299 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 PITPNAQ00169 270 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 LPIN1Q14693 890 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 DCST1Q5T197 706 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 C10orf62Q5T681 223 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 ANKS1BQ7Z6G8 1248 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 HEATR4Q86WZ0 1026 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 SLC43A3Q8NBI5 491 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 IPCEF1Q8WWN9 437 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 ART5Q96L15 291 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 C5orf34Q96MH7 638 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 MIPEPQ99797 713 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 WBP11Q9Y2W2 641 aaKnown RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 SLC30A4O14863 429 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 C1RP00736 705 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 CBSLP0DN79 551 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 CD247P20963 164 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 CBSP35520 551 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 KLF10Q13118 480 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 KLHL22Q53GT1 634 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 LACTB2Q53H82 288 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 TSTD2Q5T7W7 516 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 CPNE2Q96FN4 548 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 KCTD15Q96SI1 283 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 LGMNQ99538 433 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 PDZD7Q9H5P4 517 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 BPIFA1Q9NP55 256 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 BTRCQ9Y297 605 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 RBM7Q9Y580 266 aaKnown RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 TMEM150BA6NC51 233 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 NPEPPSL1A6NEC2 478 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 LOC110117498-PIK3R3F6TDL0 507 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 LGR5O75473 907 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 LINC00032P0C843 101 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 CCT3P49368 545 aaKnown RBP13.21□□□□□ -0.29
TRAK1-201ENST00000327628 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 PIK3R3Q92569 461 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 B3GALT6Q96L58 329 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 COMMD4Q9H0A8 199 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
TRAK1-201ENST00000327628 DDX3YO15523 660 aaKnown RBP13.21□□□□□ -0.3
TRAK1-201ENST00000327628 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.3
TRAK1-201ENST00000327628 PBX1P40424 430 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 SLC7A2P52569 658 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 SLC5A3P53794 718 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.3
TRAK1-201ENST00000327628 TWIST2Q8WVJ9 160 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 COPS5Q92905 334 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 ACDQ96AP0 544 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 TFB2MQ9H5Q4 396 aaKnown RBP13.21□□□□□ -0.3
TRAK1-201ENST00000327628 TOR4AQ9NXH8 423 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 TAS2R7Q9NYW3 318 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.3
TRAK1-201ENST00000327628 TSPAN1O60635 241 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 TM7SF2O76062 418 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 CDK14O94921 469 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 C2P06681 752 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 PSMA1P25786 263 aaKnown RBP13.2□□□□□ -0.3
TRAK1-201ENST00000327628 TAS2R40P59535 323 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 FOLH1Q04609 750 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 C9orf43Q8TAL5 461 aaPredicted RBP13.2□□□□□ -0.3
TRAK1-201ENST00000327628 SEPT4O43236 478 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 IGFBP5P24593 272 aa13.2□□□□□ -0.3
TRAK1-201ENST00000327628 CTSKP43235 329 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms