RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 LYPLAL1Q5VWZ2 237 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 CGB2Q6NT52 195 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 FAM151BQ6UXP7 276 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 ZNF852Q6ZMS4 543 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 CYP2U1Q7Z449 544 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 NRSN1Q8IZ57 195 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 AADATQ8N5Z0 425 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 DENND1AQ8TEH3 1009 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 ATXN7L3BQ96GX2 97 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 COQ10AQ96MF6 247 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 KLF6Q99612 283 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-202ENST00000324340 OMDQ99983 421 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 MKRN2Q9H000 416 aaKnown RBP12.65□□□□□ -0.38
DDX39A-202ENST00000324340 SNX15Q9NRS6 342 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
DDX39A-202ENST00000324340 SCML1Q9UN30 329 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
DDX39A-202ENST00000324340 PLXNB3Q9ULL4 1909 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 GOLGA8RI6L899 631 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 TM9SF1O15321 606 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 MID1O15344 667 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 MPOP05164 745 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ELFN1P0C7U0 828 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 CHRNB1P11230 501 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 COL9A1P20849 921 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 CD9P21926 228 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 PMLP29590 882 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 TYK2P29597 1187 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 CRHR1P34998 444 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 PTGER3P43115 390 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 STARD6P59095 220 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ZBTB16Q05516 673 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 PDE1CQ14123 709 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-202ENST00000324340 RCN2Q14257 317 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 CHRNA6Q15825 494 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 AGBL4Q5VU57 503 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ZNF549Q6P9A3 640 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 RFLNAQ6ZTI6 216 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ADGRG6Q86SQ4 1221 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 SYNPOQ8N3V7 929 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 PNPLA1Q8N8W4 532 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 RPLP0P6Q8NHW5 317 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ZNF184Q99676 751 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-202ENST00000324340 DENND2DQ9H6A0 471 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ASB8Q9H765 288 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 SMOXQ9NWM0 555 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 THEGQ9P2T0 379 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 SLC39A10Q9ULF5 831 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 COL6A3P12111 3177 aa12.64□□□□□ -0.39
DDX39A-202ENST00000324340 PLK4O00444 970 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 TSPAN6O43657 245 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 SPAG7O75391 227 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 NDUFS3O75489 264 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 C2P06681 752 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 PABPC4LP0CB38 370 aaKnown RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 FDXRP22570 491 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 RPS3P23396 243 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ACRV1P26436 265 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 CA5AP35218 305 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 PPARGP37231 505 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 TAS2R38P59533 333 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 RAB10P61026 200 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 USP10Q14694 798 aaKnown RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 KRT72Q14CN4 511 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 INSCQ1MX18 579 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 LIN52Q52LA3 116 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 RBM20Q5T481 1227 aaKnown RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 HECTD2Q5U5R9 776 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 FAM45BPQ6NSW5 357 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 LRRC74BQ6ZQY2 392 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 Q6ZVL8 140 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ZNF765Q7L2R6 523 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 CLEC14AQ86T13 490 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 TMPRSS6Q8IU80 811 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ST13P4Q8IZP2 240 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 NXPE1Q8N323 547 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 TRAM1L1Q8N609 369 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 FAM45AQ8TCE6 357 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ERP27Q96DN0 273 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 DTD2Q96FN9 168 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 ELMO2Q96JJ3 720 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 TTC1Q99614 292 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 AARSD1Q9BTE6 412 aaKnown RBP12.63□□□□□ -0.39
DDX39A-202ENST00000324340 P2RY12Q9H244 342 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 FAM83DQ9H4H8 585 aa12.63□□□□□ -0.39
DDX39A-202ENST00000324340 FAM96AQ9H5X1 160 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms