RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SMYD1Q8NB12 490 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SPATA22Q8NHS9 363 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SUN3Q8TAQ9 357 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 KLHL6Q8WZ60 621 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 TIFAQ96CG3 184 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 MED30Q96HR3 178 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 DNAJC1Q96KC8 554 aaKnown RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 MRIQ9BWK5 157 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 HIPK2Q9H2X6 1198 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 MAGEL2Q9UJ55 1249 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SETD1AO15047 1707 aaKnown RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SLC28A1O00337 649 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 PRAMEF1O95521 474 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 BCL2L1Q07817 233 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 FADDQ13158 208 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 LIPMQ5VYY2 423 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SAPCD2Q86UD0 394 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 PSTKQ8IV42 348 aaKnown RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 PLEKHM1Q9Y4G2 1056 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 RNF212BA8MTL3 300 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ALDH3B1P43353 468 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 GLRBP48167 497 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 VEGFCP49767 419 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 CTBP2P56545 445 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 COMMD2Q86X83 199 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 FBXW8Q8N3Y1 598 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SAMD4AQ9UPU9 718 aaKnown RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 TOX4O94842 621 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ASMTP46597 345 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ERFP50548 548 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 GLRA4Q5JXX5 417 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 MFSD7Q6UXD7 560 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SLC16A9Q7RTY1 509 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 HTATIP2Q9BUP3 242 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ARL15Q9NXU5 204 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 NRCAMQ92823 1304 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 COX7A2P14406 83 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 MAKP20794 623 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ATXN1P54253 815 aaKnown RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 TLE3Q04726 772 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 RAB35Q15286 201 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 CEP76Q8TAP6 659 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ADIPOR1Q96A54 375 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ACOX2Q99424 681 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 KLF6Q99612 283 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 TMEM131LA2VDJ0 1609 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SLC22A2O15244 555 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 IFNGP01579 166 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 AMHP03971 560 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 OVGP1Q12889 678 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 DAW1Q8N136 415 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 CBWD1Q9BRT8 395 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 MAPKAPK3Q16644 382 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ARMC8Q8IUR7 673 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF431Q8TF32 576 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-201ENST00000322507 NFASCO94856 1347 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 CRTC1Q6UUV9 634 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 SLC30A8Q8IWU4 369 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 OR5T3Q8NGG3 340 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 ZNF700Q9H0M5 742 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 LRRC19Q9H756 370 aa9.66□□□□□ -0.86
COL12A1-201ENST00000322507 BMP7P18075 431 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 NAT1P18440 290 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 DSTNP60981 165 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CHAF1BQ13112 559 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 PGM5Q15124 567 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 REXO5Q96IC2 774 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TPD52L3Q96J77 140 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 GFM1Q96RP9 751 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 DHX33Q9H6R0 707 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 PNMA8BQ9ULN7 279 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TULP2O00295 520 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 YKT6O15498 198 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CIDEAO60543 219 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CCNT2O60583 730 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 PSKH1P11801 424 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 COL6A2P12110 1019 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 TAF13Q15543 124 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 CNPY1Q3B7I2 92 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 LIN52Q52LA3 116 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 IL27RAQ6UWB1 636 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 NUDT15Q9NV35 164 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 IKZF3Q9UKT9 509 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 MRPS33Q9Y291 106 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 C12orf71A8MTZ7 269 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 FGF1P05230 155 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 PUM1Q14671 1186 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 MTURNQ8N3F0 131 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 NELL1Q92832 810 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 SLC25A36Q96CQ1 311 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 ACTR10Q9NZ32 417 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 EIF2B4Q9UI10 523 aaKnown RBP9.65□□□□□ -0.86
COL12A1-201ENST00000322507 ANKDD1BA6NHY2 528 aa9.65□□□□□ -0.86
COL12A1-201ENST00000322507 LRIG2O94898 1065 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms