RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 F8A1P23610 371 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 CDC20Q12834 499 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 PDK1Q15118 436 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 SEPT7Q16181 437 aaKnown RBP17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 ATP1A1-AS1Q5TC04 95 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 AVL9Q8NBF6 648 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 DNAJC7Q99615 494 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 GPR63Q9BZJ6 419 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 TUBD1Q9UJT1 453 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 MRPS18BQ9Y676 258 aaKnown RBP17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 KMOO15229 486 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 KIF1CO43896 1103 aaKnown RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 MTA2O94776 668 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 RPL10P27635 214 aaKnown RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 STAT5AP42229 794 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 NOP2P46087 812 aaKnown RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 LEPRP48357 1165 aaKnown RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 SEPHS1P49903 392 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 SH3BP2P78314 561 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 FOXM1Q08050 763 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 INSCQ1MX18 579 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 DEFB109BQ30KR1 87 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 PDPK2PQ6A1A2 396 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 ABRAXAS1Q6UWZ7 409 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 LRRTM4Q86VH4 590 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 VSIG1Q86XK7 387 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 RNF25Q96BH1 459 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 TGM7Q96PF1 710 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 CHP1Q99653 195 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 TIMM29Q9BSF4 260 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 EFHD1Q9BUP0 239 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 MAK16Q9BXY0 300 aaKnown RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 TRIT1Q9H3H1 467 aaKnown RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 GLOD4Q9HC38 313 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 BPIFA1Q9NP55 256 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF71Q9NQZ8 489 aaPredicted RBP17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 RAD18Q9NS91 495 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 UBP1Q9NZI7 540 aa17.18■□□□□ 0.34
EXOSC4-201ENST00000316052 UTP20O75691 2785 aaKnown RBP17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 OR52A4PA6NMU1 304 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 PDZK1P1A8MUH7 402 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 PMPCBO75439 489 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 CDK14O94921 469 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 NDST3O95803 873 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 AMD1P17707 334 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 DYNLT1P63172 113 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 TEX44Q53QW1 395 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 C11orf96Q7Z7L8 435 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 RFX6Q8HWS3 928 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 TRIM48Q8IWZ4 208 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 STARD8Q92502 1023 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 EPN3Q9H201 632 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 SLC40A1Q9NP59 571 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 SAE1Q9UBE0 346 aaPredicted RBP17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 TRIM10Q9UDY6 481 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 HYOU1Q9Y4L1 999 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 RPS6KL1Q9Y6S9 549 aa17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 USP9XQ93008 2570 aaPredicted RBP17.17■□□□□ 0.34
EXOSC4-201ENST00000316052 SSU72P8A0A1W2PR75 194 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 PPP1R12AO14974 1030 aaPredicted RBP17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 VEGFDO43915 354 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 AKR1B10O60218 316 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 KRT1P04264 644 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 PTPN3P26045 913 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 CD68P34810 354 aaPredicted RBP17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 DRG2P55039 364 aaKnown RBP17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 MAP7Q14244 749 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 NOMO1Q15155 1222 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 SLC14A2Q15849 920 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 ATP13A5Q4VNC0 1218 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 COLEC12Q5KU26 742 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 C16orf46Q6P387 395 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 MFSD7Q6UXD7 560 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 WASH2PQ6VEQ5 465 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 ESX1Q8N693 406 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 RSC1A1Q92681 617 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 ABHD17AQ96GS6 310 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 TEKT5Q96M29 485 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 OR6C1Q96RD1 312 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 ULBP3Q9BZM4 244 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 DEF6Q9H4E7 631 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF768Q9H5H4 540 aaKnown RBP17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 WASH6PQ9NQA3 447 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 SPTLC3Q9NUV7 552 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 WDR37Q9Y2I8 494 aa17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 USP9YO00507 2555 aaPredicted RBP17.16■□□□□ 0.34
EXOSC4-201ENST00000316052 SPTBP11277 2137 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 TOX3O15405 576 aaPredicted RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 TNNT1P13805 278 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 ZFXP17010 805 aaPredicted RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 TCN2P20062 427 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 CA5AP35218 305 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 TMEM115Q12893 351 aaPredicted RBP17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 GPR18Q14330 331 aa17.15■□□□□ 0.34
EXOSC4-201ENST00000316052 PRKD1Q15139 912 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms