RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 HBEGFQ99075 208 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 UPK3BL1B0FP48 263 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 UPK3BL2E5RIL1 263 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LATS1O95835 1130 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 GLDCP23378 1020 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 NCALDP61601 193 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 UBE3AQ05086 875 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 VAC14Q08AM6 782 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 NIPAL4Q0D2K0 466 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 AP5B1Q2VPB7 878 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LDLRAP1Q5SW96 308 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 WLSQ5T9L3 541 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 OSCP1Q8WVF1 389 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 TWIST2Q8WVJ9 160 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 OR2AG1Q9H205 316 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 TFB2MQ9H5Q4 396 aaKnown RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 PCDH12Q9NPG4 1184 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 ELOVL2Q9NXB9 296 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 SELENONQ9NZV5 590 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 B4GALT6Q9UBX8 382 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 MTF2Q9Y483 593 aaPredicted RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 TM7SF2O76062 418 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 EPCAMP16422 314 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 ATP6V1B2P21281 511 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 TIGD2Q4W5G0 525 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 DPY19L3Q6ZPD9 716 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 CILP2Q8IUL8 1156 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 FCRL3Q96P31 734 aaPredicted RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 OLFM3Q96PB7 478 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 CHCHD3Q9NX63 227 aaKnown RBP13.55□□□□□ -0.24
DDX54-202ENST00000314045 INVSQ9Y283 1065 aa13.55□□□□□ -0.24
DDX54-202ENST00000314045 IFNA14P01570 189 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 ACADSP16219 412 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 FASP25445 335 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 GNPDA1P46926 289 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 GALNT13Q8IUC8 556 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 AARSD1Q9BTE6 412 aaKnown RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 SFXN1Q9H9B4 322 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 MRPS17Q9Y2R5 130 aaKnown RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 TRBV23OR9-2A0A075B6M9 112 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 EDDM13A0A1B0GTR0 161 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 SIN3BO75182 1162 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 CHRNGP07510 517 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 STC1P52823 247 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 TMPRSS11BQ86T26 416 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 TMEM135Q86UB9 458 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 PIM3Q86V86 326 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 ZNF614Q8N883 585 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 AHCYL2Q96HN2 611 aaKnown RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 TSSK3Q96PN8 268 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 CCDC28BQ9BUN5 200 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 ZNF490Q9ULM2 529 aaPredicted RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 H0Y858 1186 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 NPHS1O60500 1241 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 OR4F21O95013 312 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 VIPR2P41587 438 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 MRPS22P82650 360 aaKnown RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 SLC34A1Q06495 639 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 CCDC85BQ15834 202 aaPredicted RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 FAM98BQ52LJ0 330 aaKnown RBP13.54□□□□□ -0.24
DDX54-202ENST00000314045 SULT1C3Q6IMI6 304 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 CYP20A1Q6UW02 462 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 GPR180Q86V85 440 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 TMEM25Q86YD3 366 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 OTULINQ96BN8 352 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 APOLD1Q96LR9 279 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 TRIM4Q9C037 500 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 ATAD3AQ9NVI7 634 aa13.54□□□□□ -0.24
DDX54-202ENST00000314045 K7ERQ8 282 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SLC22A3O75751 556 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 PPP2R1BP30154 601 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 VIPR1P32241 457 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 KLHDC10Q6PID8 442 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 TIFABQ6ZNK6 161 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 Q6ZVL8 140 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 PIGWQ7Z7B1 504 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 TMEM173Q86WV6 379 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 SIPA1Q96FS4 1042 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 MARCH5Q9NX47 278 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 PSMD13Q9UNM6 376 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SOCS5O75159 536 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 EPN2O95208 641 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 LRATO95237 230 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 KCNH1O95259 989 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms