RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PCBP4P57723 403 aaKnown RBP14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 TMEM115Q12893 351 aaPredicted RBP14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PEX6Q13608 980 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PARP6Q2NL67 630 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PLA2G4EQ3MJ16 856 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 AMZ1Q400G9 498 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 ZDHHC20Q5W0Z9 365 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 USP53Q70EK8 1073 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 LRRTM4Q86VH4 590 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC13A5Q86YT5 568 aaPredicted RBP14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 GLIS1Q8NBF1 620 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF248Q8NDW4 579 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 OR4K2Q8NGD2 314 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 OR13C4Q8NGS5 318 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 BRSK1Q8TDC3 778 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 TBL1YQ9BQ87 522 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 THSD1Q9NS62 852 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 KLC4Q9NSK0 619 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 FKBPLQ9UIM3 349 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 LOXL2Q9Y4K0 774 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PCDHGA7Q9Y5G6 932 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PRAMEF33A0A0G2JMD5 474 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 TMX2-CTNND1H3BSU7 103 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 KMOO15229 486 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 KRT86O43790 486 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 CDK14O94921 469 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 PRAMEF1O95521 474 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF7P17097 686 aaPredicted RBP14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 CETN2P41208 172 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC19A1P41440 591 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 ABCG1P45844 678 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 LIMK2P53671 638 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 HHEXQ03014 270 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 DMPKQ09013 629 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 CCDC173Q0VFZ6 552 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 MAP9Q49MG5 647 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 ABRAXAS1Q6UWZ7 409 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 FAM83HQ6ZRV2 1179 aaPredicted RBP14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 PRUNE1Q86TP1 453 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 RCBTB1Q8NDN9 531 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 NAT14Q8WUY8 206 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 PMEPA1Q969W9 287 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 BBC3Q96PG8 261 aaPredicted RBP14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 C19orf43Q9BQ61 176 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 TLR10Q9BXR5 811 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 OGFRQ9NZT2 677 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 WDR37Q9Y2I8 494 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 PTPRQQ9UMZ3 2332 aa14.37□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF106Q9H2Y7 1883 aaKnown RBP14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 KIR2DS5A0A0G2JLQ3 304 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 A0A0G2JNG1 304 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 GOLGA6L9A6NEM1 432 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 C9orf172C9J069 976 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 KIR2DS3K7RE56 304 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 AP2A1O95782 977 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 CCL4P13236 92 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 LPOP22079 712 aaPredicted RBP14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 GPLD1P80108 840 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 CLN3Q13286 438 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 KIR2DS5Q14953 304 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF658BQ4V348 819 aaPredicted RBP14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 AGAP9Q5VTM2 703 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 WASH2PQ6VEQ5 465 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 PIM3Q86V86 326 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 FBXO39Q8N4B4 442 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 OR4D9Q8NGE8 314 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 NAF1Q96HR8 494 aaKnown RBP14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 CCDC74BQ96LY2 380 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 WASH6PQ9NQA3 447 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 KCNK4Q9NYG8 393 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 CPNE7Q9UBL6 633 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 ATMQ13315 3056 aa14.36□□□□□ -0.11
PPP1CA-201ENST00000312989 LILRA5A6NI73 299 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 H7C0S8 307 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 CCL22O00626 93 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 STX7O15400 261 aaKnown RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 SNX2O60749 519 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF189O75820 626 aaPredicted RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 STK10O94804 968 aaKnown RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 CCDC175P0C221 793 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 XRCC1P18887 633 aaPredicted RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 MPSTP25325 297 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 RBMS1P29558 406 aaKnown RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC5A2P31639 672 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 NFATC2Q13469 925 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 PRPSAP1Q14558 356 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 CLCA4Q14CN2 919 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 KIF26BQ2KJY2 2108 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 P3H1Q32P28 736 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 LDLRAP1Q5SW96 308 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 FOXR1Q6PIV2 292 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 BMPERQ8N8U9 685 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF398Q8TD17 642 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 UBE2Q2Q8WVN8 375 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 TBC1D10AQ9BXI6 508 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 STRADBQ9C0K7 418 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 UCK1Q9HA47 277 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms