RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 NUP210Q8TEM1 1887 aaPredicted RBP21.03■□□□□ 0.96
ATG4D-201ENST00000309469 SCN8AQ9UQD0 1980 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 EPOPA6NHQ4 379 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 TRIM16O95361 564 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 TIMP2P16035 220 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 ZNF30P17039 623 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 VIPR1P32241 457 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 PGM1P36871 562 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 SLC6A11P48066 632 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 HK3P52790 923 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 MXRA7P84157 204 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 DNAL1Q4LDG9 190 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 ANKS6Q68DC2 871 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 TXNDC11Q6PKC3 985 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 GPR149Q86SP6 731 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 CLYBLQ8N0X4 340 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 NSUN5Q96P11 429 aaKnown RBP21.02■□□□□ 0.96
ATG4D-201ENST00000309469 FAM83CQ9BQN1 747 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 ZNF385DQ9H6B1 395 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 PKD2L2Q9NZM6 624 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 MSRAQ9UJ68 235 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 G3BP2Q9UN86 482 aaKnown RBP21.02■□□□□ 0.96
ATG4D-201ENST00000309469 PLA2G4CQ9UP65 541 aa21.02■□□□□ 0.96
ATG4D-201ENST00000309469 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 OTOL1A6NHN0 477 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 NCF1BA6NI72 391 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 NCF1CA8MVU1 366 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 FGF4P08620 206 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 COX4I1P13073 169 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 NCF1P14598 390 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 NSG1P42857 185 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 INHBCP55103 352 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 GAB4Q2WGN9 574 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 ZNF805Q5CZA5 627 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 TMEM198Q66K66 360 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 CLEC6AQ6EIG7 209 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 ARHGAP24Q8N264 748 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 ST13P5Q8NFI4 369 aaPredicted RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 ACTRT2Q8TDY3 377 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 TRPC4APQ8TEL6 797 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 AGAP11Q8TF27 550 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 ULK4Q96C45 1275 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 COPS8Q99627 209 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 C1QTNF3Q9BXJ4 246 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 TRPV4Q9HBA0 871 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 MID1IP1Q9NPA3 183 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 OBP2AQ9NY56 170 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 CDH22Q9UJ99 828 aa21.02■□□□□ 0.95
ATG4D-201ENST00000309469 ZNF106Q9H2Y7 1883 aaKnown RBP21.02■□□□□ 0.95
ATG4D-201ENST00000309469 LOC100653049A0A140TA62 436 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 UPK3BL1B0FP48 263 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 PRRT4C9JH25 899 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 UPK3BL2E5RIL1 263 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 PPP6CO00743 305 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 SLC22A2O15244 555 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 MAGEC1O60732 1142 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 SNX2O60749 519 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 KRT34O76011 436 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 RPS17P08708 135 aaKnown RBP21.01■□□□□ 0.95
ATG4D-201ENST00000309469 ADSLP30566 484 aaPredicted RBP21.01■□□□□ 0.95
ATG4D-201ENST00000309469 CPOXP36551 454 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 RGS4P49798 205 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 NAA20P61599 178 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 CLCQ05315 142 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 MESP2Q0VG99 397 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 WASHC2DQ5SRD0 308 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 ZNF366Q8N895 744 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 HCAR2Q8TDS4 363 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 NXPE3Q969Y0 559 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 CATSPER2Q96P56 530 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 LENG8Q96PV6 779 aaPredicted RBP21.01■□□□□ 0.95
ATG4D-201ENST00000309469 PCDH12Q9NPG4 1184 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 THG1LQ9NWX6 298 aaKnown RBP21.01■□□□□ 0.95
ATG4D-201ENST00000309469 CD274Q9NZQ7 290 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 DEC1Q9P2X7 70 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 DKK3Q9UBP4 350 aa21.01■□□□□ 0.95
ATG4D-201ENST00000309469 DGKAP23743 735 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 CCND1P24385 295 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 NFKBIAP25963 317 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 PIK3R1P27986 724 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 UGT3A2Q3SY77 523 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 GPRC6AQ5T6X5 926 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 ZBTB2Q8N680 514 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 DENND2DQ9H6A0 471 aaPredicted RBP21■□□□□ 0.95
ATG4D-201ENST00000309469 MEI4A8MW99 385 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 AGTR2P50052 363 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 LCP2Q13094 533 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 PDGFRLQ15198 375 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 TGFBIQ15582 683 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 FBXO48Q5FWF7 155 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 HSD11B1LQ7Z5J1 315 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 ADAMTSL2Q86TH1 951 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 SLC28A3Q9HAS3 691 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 LATS2Q9NRM7 1088 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 SPATS2LQ9NUQ6 558 aaKnown RBP21■□□□□ 0.95
ATG4D-201ENST00000309469 NUDT4Q9NZJ9 180 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 CD84Q9UIB8 345 aa21■□□□□ 0.95
ATG4D-201ENST00000309469 TSR3Q9UJK0 312 aaKnown RBP21■□□□□ 0.95
ATG4D-201ENST00000309469 PDE4DIPQ5VU43 2346 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms