RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 DNAJC16Q9Y2G8 782 aa19.56■□□□□ 0.72
VEGFB-201ENST00000309422 CABIN1Q9Y6J0 2220 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 MROH6A6NGR9 719 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 OR2AG2A6NM03 316 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 CHUKO15111 745 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 OPA1O60313 960 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 TCEA3O75764 348 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 FUCA1P04066 466 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 PNLIPP16233 465 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 ZNF7P17097 686 aaPredicted RBP19.55■□□□□ 0.72
VEGFB-201ENST00000309422 IDSP22304 550 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 FASTKD1Q53R41 847 aaKnown RBP19.55■□□□□ 0.72
VEGFB-201ENST00000309422 FNBP1LQ5T0N5 605 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 OGFOD3Q6PK18 319 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 DET1Q7L5Y6 550 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 SLC9B2Q86UD5 537 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 SH3KBP1Q96B97 665 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 C16orf45Q96MC5 204 aaPredicted RBP19.55■□□□□ 0.72
VEGFB-201ENST00000309422 SPATS2LQ9NUQ6 558 aaKnown RBP19.55■□□□□ 0.72
VEGFB-201ENST00000309422 ZDHHC3Q9NYG2 299 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 LRIT1Q9P2V4 623 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 PCYOX1Q9UHG3 505 aa19.55■□□□□ 0.72
VEGFB-201ENST00000309422 DNMT3AQ9Y6K1 912 aaPredicted RBP19.55■□□□□ 0.72
VEGFB-201ENST00000309422 CACNA1AO00555 2505 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 KIR2DS5A0A0G2JLQ3 304 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 A0A0G2JNG1 304 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 KIR2DS3K7RE56 304 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 CCL22O00626 93 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 GPR39O43194 453 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 MLNP12872 115 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 F3P13726 295 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 ACRV1P26436 265 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 PBLDP30039 288 aaPredicted RBP19.54■□□□□ 0.72
VEGFB-201ENST00000309422 GRIA1P42261 906 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 CLCNKAP51800 687 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 CKAP4Q07065 602 aaKnown RBP19.54■□□□□ 0.72
VEGFB-201ENST00000309422 MSLNQ13421 630 aaPredicted RBP19.54■□□□□ 0.72
VEGFB-201ENST00000309422 HLTFQ14527 1009 aaKnown RBP eCLIP19.54■□□□□ 0.72
VEGFB-201ENST00000309422 KCNJ11Q14654 390 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 KIR2DS5Q14953 304 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 TMEM220Q6QAJ8 160 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 RBM44Q6ZP01 1051 aaKnown RBP19.54■□□□□ 0.72
VEGFB-201ENST00000309422 NRROSQ86YC3 692 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 CREG2Q8IUH2 290 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 CCNJLQ8IV13 435 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 PPIL6Q8IXY8 311 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 SLCO2A1Q92959 643 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 TSSK1BQ9BXA7 367 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 KLK13Q9UKR3 277 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 MSRB2Q9Y3D2 182 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 PLEKHM1Q9Y4G2 1056 aa19.54■□□□□ 0.72
VEGFB-201ENST00000309422 CNOT1A5YKK6 2376 aaKnown RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 LY6G6EA0A0G2JKS1 128 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 KIF2AO00139 706 aaPredicted RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 GAPDHSO14556 408 aaPredicted RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 NOBOXO60393 691 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 TUBB4AP04350 444 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 SPINK2P20155 84 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 MGAT1P26572 445 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 MAZP56270 477 aaKnown RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 XIAPP98170 497 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 INSM1Q01101 510 aaPredicted RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 PTK6Q13882 451 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 DHX34Q14147 1143 aaKnown RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 ITIH4Q14624 930 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 SEPT7Q16181 437 aaKnown RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 MAP9Q49MG5 647 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 CERS6Q6ZMG9 384 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 SERPINA9Q86WD7 417 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 ARL14Q8N4G2 192 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 BEND7Q8N7W2 519 aaPredicted RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 AHCYL2Q96HN2 611 aaKnown RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 GFM1Q96RP9 751 aaKnown RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 SLC38A3Q99624 504 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.53■□□□□ 0.72
VEGFB-201ENST00000309422 FAM96AQ9H5X1 160 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 U3KQA8 63 aa19.53■□□□□ 0.72
VEGFB-201ENST00000309422 TMX2-CTNND1H3BSU7 103 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 MT-CO3P00414 261 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 RPLP0P05388 317 aaKnown RBP19.52■□□□□ 0.72
VEGFB-201ENST00000309422 ATP1B2P14415 290 aaPredicted RBP19.52■□□□□ 0.72
VEGFB-201ENST00000309422 NSG1P42857 185 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 MAGEA6P43360 314 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 HHEXQ03014 270 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 RASGEF1AQ8N9B8 481 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 Q8N9G6 341 aaPredicted RBP19.52■□□□□ 0.72
VEGFB-201ENST00000309422 MCUQ8NE86 351 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 OR4L1Q8NH43 312 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 CPT1BQ92523 772 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 HDAC10Q969S8 669 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 GRAMD1AQ96CP6 724 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 MRM3Q9HC36 420 aaKnown RBP19.52■□□□□ 0.72
VEGFB-201ENST00000309422 CATSPERZQ9NTU4 200 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 RNF215Q9Y6U7 377 aa19.52■□□□□ 0.72
VEGFB-201ENST00000309422 LRP4O75096 1905 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 CCDC162PA2VCL2 907 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 GOLGA8MH3BSY2 632 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 SMAPO00193 183 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 POP7O75817 140 aaKnown RBP19.51■□□□□ 0.71
VEGFB-201ENST00000309422 AP2A2O94973 939 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms