RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LRIG2O94898 1065 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 PCSK2P16519 638 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GRK5P34947 590 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 RCVRNP35243 200 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 AVPR1AP37288 418 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GLRBP48167 497 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 RABL3Q5HYI8 236 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 CCNYL2Q5T2Q4 361 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 DCP1BQ8IZD4 617 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 DTWD1Q8N5C7 304 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 STARD8Q92502 1023 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 BIRC7Q96CA5 298 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 FCRL2Q96LA5 508 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 SENP8Q96LD8 212 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 KCNA7Q96RP8 456 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 BARD1Q99728 777 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 HOPXQ9BPY8 73 aaPredicted RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 RHNO1Q9BSD3 238 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GORASP2Q9H8Y8 452 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 ABCC13Q9NSE7 274 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 INTS7Q9NVH2 962 aaKnown RBP5.41□□□□□ -1.54
VPS50-202ENST00000305866 ANKMY1Q9P2S6 941 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 GALPQ9UBC7 116 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 BCAP29Q9UHQ4 241 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 NOX1Q9Y5S8 564 aa5.41□□□□□ -1.54
VPS50-202ENST00000305866 PIKFYVEQ9Y2I7 2098 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 H7C0S8 307 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 ARNTLO00327 626 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 TNPO2O14787 897 aaKnown RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 GPIP06744 558 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 GABRB1P18505 474 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 TCN1P20061 433 aaPredicted RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 AGXTP21549 392 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 PCSK1P29120 753 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 CA5AP35218 305 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 EIF2DP41214 584 aaKnown RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 SLC35A2P78381 396 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 NME3Q13232 169 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 C16orf72Q14CZ0 275 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 KCNJ8Q15842 424 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 EML3Q32P44 896 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 LRIT3Q3SXY7 679 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 GPR107Q5VW38 600 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 WSCD1Q658N2 575 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 KDM4DQ6B0I6 523 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 DLK2Q6UY11 383 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 CATSPER4Q7RTX7 472 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 TAC4Q86UU9 113 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 PIM3Q86V86 326 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 SLC22A9Q8IVM8 553 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 TMEM199Q8N511 208 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 OR6Q1Q8NGQ2 317 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 PHF10Q8WUB8 498 aaKnown RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 SNRNP27Q8WVK2 155 aaKnown RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 EME1Q96AY2 570 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 PYCR2Q96C36 320 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 C19orf60Q96EN9 201 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 TMA16Q96EY4 203 aaKnown RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 MYEOVQ96EZ4 313 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 REXO5Q96IC2 774 aaKnown RBP5.4□□□□□ -1.54
VPS50-202ENST00000305866 TRIM54Q9BYV2 358 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 ULBP1Q9BZM6 244 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 MAGEE1Q9HCI5 957 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 SERHLQ9NQF3 203 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 HEBP1Q9NRV9 189 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 PSME2Q9UL46 239 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 SLC39A10Q9ULF5 831 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 PCDHB3Q9Y5E6 796 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 SNX13Q9Y5W8 968 aa5.4□□□□□ -1.54
VPS50-202ENST00000305866 A0A1W2PP18 115 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 DHRS12A0PJE2 317 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 C17orf102A2RUQ5 167 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 GLTPD2A6NH11 291 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 MRASO14807 208 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 DUSP11O75319 330 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 OXSR1O95747 527 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 C1RP00736 705 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CHRNA1P02708 482 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CYBAP13498 195 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 GGT1P19440 569 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 OGNP20774 298 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 HMOX2P30519 316 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 TGFBR1P36897 503 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 ETFBP38117 255 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 AFF1P51825 1210 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 KPNA2P52292 529 aaKnown RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 DIO3P55073 304 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 PHC1P78364 1004 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 GNA12Q03113 381 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 SYT6Q5T7P8 510 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 CAPN13Q6MZZ7 669 aaPredicted RBP5.4□□□□□ -1.55
VPS50-202ENST00000305866 UGT3A1Q6NUS8 523 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 GPR141Q7Z602 305 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 DHFR2Q86XF0 187 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 CAMK1DQ8IU85 385 aa5.4□□□□□ -1.55
VPS50-202ENST00000305866 RASGRP3Q8IV61 690 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms