RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 OR52B2Q96RD2 323 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 BOCQ9BWV1 1114 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 NUF2Q9BZD4 464 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 NSUN3Q9H649 340 aaKnown RBP10.48□□□□□ -0.73
CLP1-201ENST00000302731 HPS4Q9NQG7 708 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 ACSS2Q9NR19 701 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 SPATS2LQ9NUQ6 558 aaKnown RBP10.48□□□□□ -0.73
CLP1-201ENST00000302731 GTSE1Q9NYZ3 720 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 NUDT4Q9NZJ9 180 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 IKZF3Q9UKT9 509 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 TRAF6Q9Y4K3 522 aa10.48□□□□□ -0.73
CLP1-201ENST00000302731 NPEPPSL1A6NEC2 478 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 C16orf96A6NNT2 1141 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 PRRT4C9JH25 899 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 SDHDO14521 159 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 WFS1O76024 890 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 SLC25A14O95258 325 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 NCF2P19878 526 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 EPHA3P29320 983 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 CA5AP35218 305 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 HYAL1Q12794 435 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 CDC16Q13042 620 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 LCP2Q13094 533 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 NAA25Q14CX7 972 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ATP13A5Q4VNC0 1218 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ERAP2Q6P179 960 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 GPSM1Q86YR5 675 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 HOMEZQ8IX15 550 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 MYO1HQ8N1T3 1032 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 PHTF2Q8N3S3 785 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 TRAM1L1Q8N609 369 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ZBTB2Q8N680 514 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 TERB1Q8NA31 727 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 UCMAQ8WVF2 138 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 TIFAQ96CG3 184 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 MIPEPQ99797 713 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 CADM1Q9BY67 442 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ZNF385DQ9H6B1 395 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 TNPO3Q9Y5L0 923 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 OTOL1A6NHN0 477 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 IQCF5A8MTL0 148 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 A8MX80 341 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 B2RBV5 119 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 E9PBE3 544 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 H0Y858 1186 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 UBFD1O14562 309 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 KLHL41O60662 606 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 SNX2O60749 519 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 CDK14O94921 469 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 MLYCDO95822 493 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 OR56A5P0C7T3 313 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ENO3P13929 434 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 MMP12P39900 470 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 SLC6A11P48066 632 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 COPAP53621 1224 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 IRX1P78414 480 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 CLCQ05315 142 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 RALGDSQ12967 914 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 KLF10Q13118 480 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 RUNX3Q13761 415 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ELAVL3Q14576 367 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 HERC3Q15034 1050 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 PCBP2Q15366 365 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLP1-201ENST00000302731 TGFBIQ15582 683 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 PDCD2Q16342 344 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 ATAT1Q5SQI0 421 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 TANGO2Q6ICL3 276 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 VITQ6UXI7 678 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 RINLQ6ZS11 566 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 CHSY3Q70JA7 882 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 EFL1Q7Z2Z2 1120 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 LONP2Q86WA8 852 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 NRSN1Q8IZ57 195 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 CHCHD4Q8N4Q1 142 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ZNF483Q8TF39 744 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 MYLIPQ8WY64 445 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 OR8D1Q8WZ84 308 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 EXT2Q93063 718 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 NXPE3Q969Y0 559 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ZFYVE19Q96K21 471 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 ZSCAN5AQ9BUG6 496 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 SHCBP1LQ9BZQ2 653 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 TMEM245Q9H330 911 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 IGFLR1Q9H665 355 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 SARS2Q9NP81 518 aaKnown RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 KCTD5Q9NXV2 234 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 STK38LQ9Y2H1 464 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 PRSS21Q9Y6M0 314 aa10.47□□□□□ -0.73
CLP1-201ENST00000302731 MUC22E2RYF6 1773 aaPredicted RBP10.47□□□□□ -0.73
CLP1-201ENST00000302731 KIAA1549LQ6ZVL6 1849 aa10.46□□□□□ -0.73
CLP1-201ENST00000302731 TMEM233B4DJY2 109 aa10.46□□□□□ -0.74
CLP1-201ENST00000302731 CFAP99D6REC4 459 aa10.46□□□□□ -0.74
CLP1-201ENST00000302731 QSOX1O00391 747 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms