RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ACBD6Q9BR61 282 aa13.94□□□□□ -0.18
SDC2-201ENST00000302190 KLHL25Q9H0H3 589 aa13.94□□□□□ -0.18
SDC2-201ENST00000302190 OPTCQ9UBM4 332 aa13.94□□□□□ -0.18
SDC2-201ENST00000302190 ITGB1BP2Q9UKP3 347 aa13.94□□□□□ -0.18
SDC2-201ENST00000302190 CYBBP04839 570 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 FCGR1AP12314 374 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 EIF2B2P49770 351 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 AIF1P55008 147 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 FOXA1P55317 472 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 NR1D2Q14995 579 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 PLA2G4EQ3MJ16 856 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 SPPL2AQ8TCT8 520 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 RAET1EQ8TD07 263 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 MED8Q96G25 268 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 AMBNQ9NP70 447 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 SELENONQ9NZV5 590 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 AGO1Q9UL18 857 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 CDC14AQ9UNH5 594 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 SLC7A1P30825 629 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 ATP5C1P36542 298 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 RAD23AP54725 363 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 LCP2Q13094 533 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 KCTD8Q6ZWB6 473 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 HEATR4Q86WZ0 1026 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 TTC9BQ8N6N2 239 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 LRRC58Q96CX6 371 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 ADGRE2Q9UHX3 823 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 EVLQ9UI08 416 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 MOSPD1Q9UJG1 213 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 GIT1Q9Y2X7 761 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 DYTNA2CJ06 578 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 HTR3EA5X5Y0 456 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 ARPC2O15144 300 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 RGS5O15539 181 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 HTRA2O43464 458 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 RSL1D1O76021 490 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 F2P00734 622 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 FTH1P02794 183 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 ASGR1P07306 291 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 IMPDH1P20839 514 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 MTHFRP42898 656 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 IDH2P48735 452 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 IST1P53990 364 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 MLLT6P55198 1093 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 UBE3AQ05086 875 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 CCDC85BQ15834 202 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 ATXN7L2Q5T6C5 722 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 GDF6Q6KF10 455 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 EFL1Q7Z2Z2 1120 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 ZNF296Q8WUU4 475 aaPredicted RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 TMEM30AQ9NV96 361 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 TMEM98Q9Y2Y6 226 aa13.93□□□□□ -0.18
SDC2-201ENST00000302190 RBMX2Q9Y388 322 aaKnown RBP13.93□□□□□ -0.18
SDC2-201ENST00000302190 LOC100506127A0A0U1RQW1 187 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 AXIN1O15169 862 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 OR1I1O60431 355 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 MAFKO60675 156 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 ULK1O75385 1050 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 RPP40O75818 363 aaKnown RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 FYNP06241 537 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 PKMP14618 531 aaKnown RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 KCNE1P15382 129 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 ITGALP20701 1170 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 LPOP22079 712 aaPredicted RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 UGT1A1P22309 533 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 UGT1A4P22310 534 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 GLDCP23378 1020 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 MZF1P28698 734 aaPredicted RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 RPL9P32969 192 aaKnown RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 UGT1A3P35503 534 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 UGT1A5P35504 534 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 SOAT1P35610 550 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 GSK3BP49841 420 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 MERTKQ12866 999 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 BTG3Q14201 252 aaPredicted RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 THOC7Q6I9Y2 204 aaKnown RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 PRMT9Q6P2P2 845 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 AGMOQ6ZNB7 445 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 CILP2Q8IUL8 1156 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 C8orf59Q8N0T1 100 aaPredicted RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 OR2T12Q8NG77 320 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 KCTD13Q8WZ19 329 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 OTULINQ96BN8 352 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 DDX28Q9NUL7 540 aaKnown RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 SMPD3Q9NY59 655 aaPredicted RBP13.92□□□□□ -0.18
SDC2-201ENST00000302190 TRPM5Q9NZQ8 1165 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 GNG14A0A1W2PPG7 69 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 SOCS2O14508 198 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 CD97P48960 835 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 SH3BP2P78314 561 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 C11orf96Q7Z7L8 435 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 TAGAPQ8N103 731 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 SLC35B4Q969S0 331 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 PYCR2Q96C36 320 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 C3orf30Q96M34 536 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 TRMOQ9BU70 441 aa13.92□□□□□ -0.18
SDC2-201ENST00000302190 C6orf62Q9GZU0 229 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms