RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 TMEM9Q9P0T7 183 aa16.2■□□□□ 0.18
RECQL4-201ENST00000301323 AAR2Q9Y312 384 aaKnown RBP16.2■□□□□ 0.18
RECQL4-201ENST00000301323 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
RECQL4-201ENST00000301323 TRBV23OR9-2A0A075B6M9 112 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 GLYATL1P3A0A0U1RQE8 302 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 HGSO14964 777 aaPredicted RBP16.19■□□□□ 0.18
RECQL4-201ENST00000301323 KMOO15229 486 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 KLK10O43240 276 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 SNX2O60749 519 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 CDK14O94921 469 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 THRAP10827 490 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 SLC5A2P31639 672 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 LIMK2P53671 638 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 GSDMDP57764 484 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 UBE2IP63279 158 aaKnown RBP16.19■□□□□ 0.18
RECQL4-201ENST00000301323 PTPRCAPQ14761 206 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 INSCQ1MX18 579 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 RNF10Q8N5U6 811 aaKnown RBP16.19■□□□□ 0.18
RECQL4-201ENST00000301323 TTC13Q8NBP0 860 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 RCBTB1Q8NDN9 531 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 OR4D9Q8NGE8 314 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 SLC35B2Q8TB61 432 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 BBC3Q96PG8 261 aaPredicted RBP16.19■□□□□ 0.18
RECQL4-201ENST00000301323 CMKLR1Q99788 373 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 DPH1Q9BZG8 443 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 OSGEPL1Q9H4B0 414 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 PKP3Q9Y446 797 aa16.19■□□□□ 0.18
RECQL4-201ENST00000301323 GOLGA6L9A6NEM1 432 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 C5orf60A6NFR6 353 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 AGRPO00253 132 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 DUX1O43812 170 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A9O60656 530 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 ZNF7P17097 686 aaPredicted RBP16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A6P19224 532 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A1P22309 533 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A4P22310 534 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A3P35503 534 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 EPHA4P54764 986 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 GDF10P55107 478 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 CLN3Q13286 438 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 NFATC2Q13469 925 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 TRA2AQ13595 282 aaKnown RBP eCLIP16.18■□□□□ 0.18
RECQL4-201ENST00000301323 TAF1AQ15573 450 aaPredicted RBP16.18■□□□□ 0.18
RECQL4-201ENST00000301323 GPRC6AQ5T6X5 926 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 DENND5AQ6IQ26 1287 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 SLC9B2Q86UD5 537 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 TRAPPC5Q8IUR0 188 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 FAM71DQ8N9W8 422 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 PPP1R2P1Q96PQ5 205 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 SLC38A3Q99624 504 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 TBL1YQ9BQ87 522 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 TSGA10Q9BZW7 698 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 STN1Q9H668 368 aaKnown RBP16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A7Q9HAW7 530 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A10Q9HAW8 530 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 UGT1A8Q9HAW9 530 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.18■□□□□ 0.18
RECQL4-201ENST00000301323 SCHIP1Q9P0W5 487 aaPredicted RBP16.18■□□□□ 0.18
RECQL4-201ENST00000301323 PDP2Q9P2J9 529 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 CPNE7Q9UBL6 633 aa16.18■□□□□ 0.18
RECQL4-201ENST00000301323 CFAP46Q8IYW2 2715 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 PRAMEF33A0A0G2JMD5 474 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 LILRA5A6NI73 299 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 OR5K4A6NMS3 321 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 C9orf172C9J069 976 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 NVLO15381 856 aaKnown RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 STX7O15400 261 aaKnown RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 PRAMEF10O60809 474 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 PRAMEF1O95521 474 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 BRAFP15056 766 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 LPOP22079 712 aaPredicted RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 ZNF140P52738 457 aaPredicted RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 UCNP55089 124 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 TMPRSS3P57727 454 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 TMEM115Q12893 351 aaPredicted RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 ITGA9Q13797 1035 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 GTF2H3Q13889 308 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 PRPSAP1Q14558 356 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 LDLRAP1Q5SW96 308 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 KCTD11Q693B1 232 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 JAMLQ86YT9 394 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 RASGEF1AQ8N9B8 481 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 AVL9Q8NBF6 648 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 OR4K2Q8NGD2 314 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 OR10G6Q8NH81 332 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 GDAP1Q8TB36 358 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 CCDC97Q96F63 343 aaPredicted RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 DPYSL5Q9BPU6 564 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 ZCCHC2Q9C0B9 1178 aaKnown RBP16.17■□□□□ 0.18
RECQL4-201ENST00000301323 ARNT2Q9HBZ2 717 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 CPNE5Q9HCH3 593 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 FOXJ2Q9P0K8 574 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 DNAJC16Q9Y2G8 782 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 KCTD3Q9Y597 815 aa16.17■□□□□ 0.18
RECQL4-201ENST00000301323 EIF4E1BA6NMX2 242 aaKnown RBP16.16■□□□□ 0.18
RECQL4-201ENST00000301323 ARHGAP6O43182 974 aa16.16■□□□□ 0.18
RECQL4-201ENST00000301323 METTL18O95568 372 aa16.16■□□□□ 0.18
RECQL4-201ENST00000301323 PTMAP06454 111 aaKnown RBP16.16■□□□□ 0.18
RECQL4-201ENST00000301323 CCL4P13236 92 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms