RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 RAP2AP10114 183 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 CLK1P49759 484 aaKnown RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 SIM2Q14190 667 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 LAPTM4AQ15012 233 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 TRIP4Q15650 581 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 OSTM1Q86WC4 334 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 MICU2Q8IYU8 434 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 OR6Q1Q8NGQ2 317 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 OR13J1Q8NGT2 312 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 BPIFB1Q8TDL5 484 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 FAM162AQ96A26 154 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 THUMPD3Q9BV44 507 aaKnown RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 ENTPD7Q9NQZ7 604 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 PAK1IP1Q9NWT1 392 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 MARCH4Q9P2E8 410 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 MAGEL2Q9UJ55 1249 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 NUDT5Q9UKK9 219 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 IFT52Q9Y366 437 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 SCN4AP35499 1836 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 SLC22A1O15245 554 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 ANGPTL1O95841 491 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 MOCS2O96007 188 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 FYNP06241 537 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 ALOX12P18054 663 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 GTF2E2P29084 291 aaKnown RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 DGKQP52824 942 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 FOXM1Q08050 763 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 OR4D1Q15615 310 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 ZNF486Q96H40 463 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 LRRC3Q9BY71 257 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 RIBC2Q9H4K1 309 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 PRDM8Q9NQV8 689 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 CACNG4Q9UBN1 327 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 KCTD3Q9Y597 815 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 TIMM13Q9Y5L4 95 aaPredicted RBP10.18□□□□□ -0.78
LMX1A-201ENST00000294816 GPR45Q9Y5Y3 372 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 GJA3Q9Y6H8 435 aa10.18□□□□□ -0.78
LMX1A-201ENST00000294816 LOC100130705A0A1B0GUX0 176 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ANKRD34BA5PLL1 514 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 H0Y626 953 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 IDH3BO43837 385 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TRIM16O95361 564 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PRDX3P30048 256 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ALDH7A1P49419 539 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 NEK2P51955 445 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 MRPS15P82914 257 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 GALNT1Q10472 559 aaPredicted RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PTPRCAPQ14761 206 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 HIST2H2ACQ16777 129 aaPredicted RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 UBE2UQ5VVX9 321 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 CLEC20AQ6ZU45 233 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PTRH1Q86Y79 214 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 FBXO39Q8N4B4 442 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 LRRC52Q8N7C0 313 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PAPD5Q8NDF8 572 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ZHX1-C8orf76Q96EF9 292 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 L3HYPDHQ96EM0 354 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 AURKBQ96GD4 344 aaPredicted RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ZNF419Q96HQ0 510 aaPredicted RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 UBXN10Q96LJ8 280 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 FCRL5Q96RD9 977 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 MBOAT4Q96T53 435 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 NEK6Q9HC98 313 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TREX1Q9NSU2 369 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 GJD2Q9UKL4 321 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 RNF112Q9ULX5 631 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PCDHGA3Q9Y5H0 932 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TAF4O00268 1085 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 UPK1AO00322 258 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 GUCY1B2O75343 617 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 MATN4O95460 622 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 EIF2S1P05198 315 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 DBTP11182 482 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 HTR1EP28566 365 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ARSDP51689 593 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 VAC14Q08AM6 782 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 NPTX1Q15818 432 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 FAM187BQ17R55 369 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TXNDC11Q6PKC3 985 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 GPRIN1Q7Z2K8 1008 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PHYKPLQ8IUZ5 450 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 MMAAQ8IVH4 418 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TMEM199Q8N511 208 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 FAR1Q8WVX9 515 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 GAD1Q99259 594 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 PRKD2Q9BZL6 878 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 TRIT1Q9H3H1 467 aaKnown RBP10.17□□□□□ -0.78
LMX1A-201ENST00000294816 NT5MQ9NPB1 228 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ZNF639Q9UID6 485 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 FAM50BQ9Y247 325 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 ILVBLA1L0T0 632 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 BCKDKO14874 412 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 NUAK1O60285 661 aa10.17□□□□□ -0.78
LMX1A-201ENST00000294816 MITFO75030 526 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms