RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CLPBQ9H078 707 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 ASB8Q9H765 288 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 MEAF6Q9HAF1 191 aa9.06□□□□□ -0.96
PDPN-201ENST00000294489 SARS2Q9NP81 518 aaKnown RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 NFKBIL1Q9UBC1 381 aaPredicted RBP9.06□□□□□ -0.96
PDPN-201ENST00000294489 MYO7AQ13402 2215 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TTC34A8MYJ7 566 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 H0Y3Z8 333 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 RFXAPO00287 272 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 GPC4O75487 556 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CLDN7O95471 211 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ANP32DO95626 131 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 BPIP17213 487 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 PTSQ03393 145 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ACSBG2Q5FVE4 666 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 PTRHD1Q6GMV3 140 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 GRAMD4Q6IC98 578 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 Q6ZVU0 165 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 USP45Q70EL2 814 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 RAVER1Q8IY67 606 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 RBFAQ8N0V3 343 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 NAT16Q8N8M0 369 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CFAP61Q8NHU2 1237 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CD200R1Q8TD46 325 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 WDR60Q8WVS4 1066 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ELSPBP1Q96BH3 223 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TIFAQ96CG3 184 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 HEPHQ9BQS7 1158 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 PRO3102Q9H379 93 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 IL26Q9NPH9 171 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 THG1LQ9NWX6 298 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 TMCO1Q9UM00 188 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 GLYATL1P3A0A0U1RQE8 302 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SNX2O60749 519 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CTSLP07711 333 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 INHBCP55103 352 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CDH13P55290 713 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 NFATC2Q13469 925 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 EIF4HQ15056 248 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 CCDC6Q16204 474 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 GPR33Q49SQ1 333 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 PREPLQ4J6C6 727 aaPredicted RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 WLSQ5T9L3 541 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 C1orf146Q5VVC0 180 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ZDHHC20Q5W0Z9 365 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TMEM198Q66K66 360 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ANKS6Q68DC2 871 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TANGO2Q6ICL3 276 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TXNDC11Q6PKC3 985 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SERPINA9Q86WD7 417 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 FUBP1Q96AE4 644 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 CHFRQ96EP1 664 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 LINGO1Q96FE5 620 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 PLEKHG4BQ96PX9 1271 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 EBF2Q9HAK2 575 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ZBTB26Q9HCK0 441 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SLC7A8Q9UHI5 535 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CRLS1Q9UJA2 301 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 LRRK1Q38SD2 2015 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 NPEPPSL1A6NEC2 478 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CDC7O00311 574 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 UBFD1O14562 309 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 ECI2O75521 394 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SIX3O95343 332 aaPredicted RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 FGF4P08620 206 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TSPAN8P19075 237 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 LHCGRP22888 699 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SPAM1P38567 509 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 EIF2DP41214 584 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 RECQLP46063 649 aaPredicted RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 POLR2LP62875 67 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 HERC3Q15034 1050 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 SNX32Q86XE0 403 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TDHQ8IZJ6 230 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 DEFB107AQ8IZN7 70 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CYB5D2Q8WUJ1 264 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 EEF1AKMT1Q8WVE0 214 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 NXPE3Q969Y0 559 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 CLPTM1LQ96KA5 538 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 SLC30A3Q99726 388 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ZNF385DQ9H6B1 395 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ZDHHC6Q9H6R6 413 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 MID1IP1Q9NPA3 183 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 LATS2Q9NRM7 1088 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 ELOVL2Q9NXB9 296 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 NDE1Q9NXR1 346 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 GALPQ9UBC7 116 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 NKX1-2Q9UD57 310 aaPredicted RBP9.05□□□□□ -0.96
PDPN-201ENST00000294489 GNPTGQ9UJJ9 305 aa9.05□□□□□ -0.96
PDPN-201ENST00000294489 TCF20Q9UGU0 1960 aaKnown RBP9.04□□□□□ -0.96
PDPN-201ENST00000294489 IGLV3-16A0A075B6K0 115 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 A0A088AWK7 358 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 PRRT4C9JH25 899 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 STX16-NPEPL1H3BU86 382 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 ARNTLO00327 626 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 STX16O14662 325 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 UBDO15205 165 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 GPR39O43194 453 aa9.04□□□□□ -0.96
PDPN-201ENST00000294489 TSPAN12O95859 305 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms