RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MYCLP1P12525 358 aaPredicted RBP16.02■□□□□ 0.15
SSRP1-202ENST00000293880 CLCC1Q96S66 551 aa16.02■□□□□ 0.15
SSRP1-202ENST00000293880 KLRC4O43908 158 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 MATN4O95460 622 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 APOC1P02654 83 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 LPOP22079 712 aaPredicted RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 LSM12Q3MHD2 195 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 GCNT6Q5T4J0 391 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CHERPQ8IWX8 916 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ARMC10Q8N2F6 343 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 MFSD1Q9H3U5 465 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 GPN3Q9UHW5 284 aaPredicted RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 SAMD4AQ9UPU9 718 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 PCDHB9Q9Y5E1 797 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 MEGF6O75095 1541 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ITGB1P05556 798 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 PSKH1P11801 424 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CD40LGP29965 261 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 TAPT1Q6NXT6 567 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ATCAYQ86WG3 371 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CPSF7Q8N684 471 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 C2orf49Q9BVC5 232 aaPredicted RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 FGFBP2Q9BYJ0 223 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 PRRG4Q9BZD6 226 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ACSS3Q9H6R3 686 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 PLLPQ9Y342 182 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 IFNGP01579 166 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 TXNL4AP83876 142 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 NAE1Q13564 534 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 THAP5Q7Z6K1 395 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 SEC14L3Q9UDX4 400 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 VWA7Q9Y334 891 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 MFHAS1Q9Y4C4 1052 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CLPXO76031 633 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CD48P09326 243 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 GNALP38405 381 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 RPL6Q02878 288 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 GANABQ14697 944 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CBR4Q8N4T8 237 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 XAGE5Q8WWM1 108 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF670Q9BS34 389 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 AGO3Q9H9G7 860 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 STMND1H3BQB6 276 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 SAP18O00422 153 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ERN1O75460 977 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 RB1P06400 928 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 NUDT17P0C025 328 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 THEGLP0DJG4 465 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ARL3P36405 182 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 CXCL17Q6UXB2 119 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 SPATA19Q7Z5L4 167 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ZZZ3Q8IYH5 903 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 ZBTB2Q8N680 514 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
SSRP1-202ENST00000293880 REXO2Q9Y3B8 237 aaKnown RBP16.01■□□□□ 0.15
SSRP1-202ENST00000293880 SLC35G4P0C7Q5 338 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 ELFN1P0C7U0 828 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 NR2F6P10588 404 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 UROSP10746 265 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 THRBP10828 461 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 CRHR1P34998 444 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 WASP42768 502 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 UBAP2Q5T6F2 1119 aaKnown RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF781Q8N8C0 355 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 OR2L3Q8NG85 312 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 RBM4BQ9BQ04 359 aaKnown RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 RBM4Q9BWF3 364 aaKnown RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF350Q9GZX5 532 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 LRTM1Q9HBL6 345 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 NEUROD4Q9HD90 331 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 CHRAC1Q9NRG0 131 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 AGLP35573 1532 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 CDH12P55289 794 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 MRPS6P82932 125 aaKnown RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 C2orf80Q0P641 193 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 DNASE1L3Q13609 305 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 MYBPC3Q14896 1274 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 ZNF697Q5TEC3 545 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 ANKRD22Q5VYY1 191 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 PHF13Q86YI8 300 aaPredicted RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 TMEM161BQ8NDZ6 487 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 OR10H5Q8NGA6 315 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 IFT46Q9NQC8 304 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 CKLFQ9UBR5 152 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 M0R036 132 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 RASGRP1O95267 797 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 NT5EP21589 574 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 FAUP35544 74 aaKnown RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 BRCC3P46736 316 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 ATXN1P54253 815 aaKnown RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 MREGQ8N565 214 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 RFT1Q96AA3 541 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 CDH5P33151 784 aaPredicted RBP16■□□□□ 0.15
SSRP1-202ENST00000293880 IDH3AP50213 366 aa16■□□□□ 0.15
SSRP1-202ENST00000293880 SLC5A3P53794 718 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms