RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 VPS4BO75351 444 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 SEC24AO95486 1093 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 C1RP00736 705 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 BMP2P12643 396 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 NCK1P16333 377 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 RPL10P27635 214 aaKnown RBP19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 ARL1P40616 181 aaPredicted RBP19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 SP3Q02447 781 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 CREB5Q02930 508 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 HABP4Q5JVS0 413 aaKnown RBP19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 EPHX4Q8IUS5 362 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 CBR4Q8N4T8 237 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 C2orf15Q8WU43 125 aaKnown RBP19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 TMEM125Q96AQ2 219 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 MPP4Q96JB8 637 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 TMEM74Q96NL1 305 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 C1QTNF3Q9BXJ4 246 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 ADGRE3Q9BY15 652 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 USP22Q9UPT9 525 aa19.75■□□□□ 0.75
SCUBE1-201ENST00000290460 HMGA1P17096 107 aaKnown RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 PSMA3P25788 255 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 MZF1P28698 734 aaPredicted RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 ELAVL2Q12926 359 aaKnown RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 TIGD2Q4W5G0 525 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 NHSL2Q5HYW2 709 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 ADGRF1Q5T601 910 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 LCN8Q6JVE9 175 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 GPRIN3Q6ZVF9 776 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 TTC30BQ8N4P2 665 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 SLC43A3Q8NBI5 491 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 BHMTQ93088 406 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 EID2BQ96D98 161 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 CAAP1Q9H8G2 361 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 PIKFYVEQ9Y2I7 2098 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 AQP12BA6NM10 295 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 MLYCDO95822 493 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 CHEK2O96017 543 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 CTPS1P17812 591 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 IL12AP29459 219 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 GSK3BP49841 420 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 PLOD1Q02809 727 aaPredicted RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 RBBP5Q15291 538 aaKnown RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 TGFBIQ15582 683 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 ATXN7L2Q5T6C5 722 aaPredicted RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 KRT80Q6KB66 452 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 PPP4R4Q6NUP7 873 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 SPATA19Q7Z5L4 167 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 NPAS4Q8IUM7 802 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 AQP12AQ8IXF9 295 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 KIAA2013Q8IYS2 634 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 TSPAN14Q8NG11 270 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 OR56A4Q8NGH8 313 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 NUDT8Q8WV74 236 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 ALG2Q9H553 416 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 PIF1Q9H611 641 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 OLAHQ9NV23 265 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 ACTR3BQ9P1U1 418 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 FCF1Q9Y324 198 aaKnown RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 PCDHB9Q9Y5E1 797 aa19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 MKI67P46013 3256 aaKnown RBP19.74■□□□□ 0.75
SCUBE1-201ENST00000290460 GIPC1O14908 333 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 SLC22A3O75751 556 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 GNAO1P09471 354 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 PSMA4P25789 261 aaKnown RBP19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 ERVPABLB-1P60509 514 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 BNIP2Q12982 314 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 INPP5AQ14642 412 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 LETMD1Q6P1Q0 360 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 TXNDC11Q6PKC3 985 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 ADGRG5Q8IZF4 528 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 FNDC5Q8NAU1 212 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 PLD4Q96BZ4 506 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 NUSAP1Q9BXS6 441 aaKnown RBP19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 TRIM15Q9C019 465 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 AGPAT4Q9NRZ5 378 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 INTS7Q9NVH2 962 aaKnown RBP19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 VPS9D1Q9Y2B5 631 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 CCDC154A6NI56 674 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 ARVCFO00192 962 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 INPP4BO15327 924 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 ALPIP09923 528 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 PLD1Q13393 1074 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 LHX8Q68G74 356 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 SLC8B1Q6J4K2 584 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 CMTR2Q8IYT2 770 aaKnown RBP19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 CARNMT1Q8N4J0 409 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 OR6K2Q8NGY2 324 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 KCNJ9Q92806 393 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 SRRDQ9UH36 339 aa19.73■□□□□ 0.75
SCUBE1-201ENST00000290460 DLGAP1O14490 977 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 H6PDO95479 791 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 HTR6P50406 440 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 CLCN7P51798 805 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 POLR2JP52435 117 aaKnown RBP19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 NR1H2P55055 460 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 LIPEQ05469 1076 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 CYP51A1Q16850 503 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 C11orf91Q3C1V1 193 aa19.72■□□□□ 0.75
SCUBE1-201ENST00000290460 PLA2G4EQ3MJ16 856 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms