RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 LRIG1Q96JA1 1093 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 CDCA3Q99618 268 aaPredicted RBP10.07□□□□□ -0.8
C9orf43-201ENST00000288462 CIPCQ9C0C6 399 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 DENND2DQ9H6A0 471 aaPredicted RBP10.07□□□□□ -0.8
C9orf43-201ENST00000288462 SARS2Q9NP81 518 aaKnown RBP10.07□□□□□ -0.8
C9orf43-201ENST00000288462 OBP2AQ9NY56 170 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 ZDHHC3Q9NYG2 299 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 NUDT4Q9NZJ9 180 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 NFKBIL1Q9UBC1 381 aaPredicted RBP10.07□□□□□ -0.8
C9orf43-201ENST00000288462 DKK3Q9UBP4 350 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 DENND4AQ7Z401 1863 aa10.07□□□□□ -0.8
C9orf43-201ENST00000288462 UPK3BL1B0FP48 263 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 UPK3BL2E5RIL1 263 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PEX11AO75192 247 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 LEFTY1O75610 366 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 TM7SF2O76062 418 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 NFATC1O95644 943 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CTSLP07711 333 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CYP2A6P11509 494 aaPredicted RBP10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ARSAP15289 507 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 GM2AP17900 193 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 TSPAN8P19075 237 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 FSHRP23945 695 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PGM1P36871 562 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CDH13P55290 713 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 DCDC1P59894 354 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 SH3BP2P78314 561 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 LRRC73Q5JTD7 316 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 GPRC6AQ5T6X5 926 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 TMEM198Q66K66 360 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 SBSNQ6UWP8 590 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 RFLNAQ6ZTI6 216 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 GPSM1Q86YR5 675 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 SUGP1Q8IWZ8 645 aaKnown RBP10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CEP70Q8NHQ1 597 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 HCAR2Q8TDS4 363 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 AGAP11Q8TF27 550 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 FGF13Q92913 245 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ULK4Q96C45 1275 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 NSUN5Q96P11 429 aaKnown RBP10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CATSPER2Q96P56 530 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 TRPV4Q9HBA0 871 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 SMOXQ9NWM0 555 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 IL36AQ9UHA7 158 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PCTPQ9UKL6 214 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 SLC8A2Q9UPR5 921 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PDE4DIPQ5VU43 2346 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 TCF20Q9UGU0 1960 aaKnown RBP10.06□□□□□ -0.8
C9orf43-201ENST00000288462 FCARP24071 287 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 NSG1P42857 185 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CLCQ05315 142 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 TGFBIQ15582 683 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CRY1Q16526 586 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PPP1R3AQ16821 1122 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ATP13A5Q4VNC0 1218 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ARSIQ5FYB1 569 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ANKS6Q68DC2 871 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 NXNQ6DKJ4 435 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CLEC6AQ6EIG7 209 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CLYBLQ8N0X4 340 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ZBTB2Q8N680 514 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 CLDN19Q8N6F1 224 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 DTX3LQ8TDB6 740 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 RTKNQ9BST9 563 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PBX4Q9BYU1 374 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 ZBTB26Q9HCK0 441 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 MRGBPQ9NV56 204 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 GDE1Q9NZC3 331 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 PKD2L2Q9NZM6 624 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 KLHL42Q9P2K6 505 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 FIS1Q9Y3D6 152 aa10.06□□□□□ -0.8
C9orf43-201ENST00000288462 COPG1Q9Y678 874 aaKnown RBP10.06□□□□□ -0.8
C9orf43-201ENST00000288462 EPOPA6NHQ4 379 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 PPP6CO00743 305 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 AZIN1O14977 448 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 CHUKO15111 745 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 SLC25A14O95258 325 aaPredicted RBP10.05□□□□□ -0.8
C9orf43-201ENST00000288462 TIMP2P16035 220 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 CCND1P24385 295 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 RGS4P49798 205 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 MXRA7P84157 204 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 B4GALNT1Q00973 533 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 RALGDSQ12967 914 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 ZNF805Q5CZA5 627 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 RARS2Q5T160 578 aaKnown RBP10.05□□□□□ -0.8
C9orf43-201ENST00000288462 DPPA4Q7L190 304 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 GPR149Q86SP6 731 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 ULK2Q8IYT8 1036 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 PDPRQ8NCN5 879 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 NXPE3Q969Y0 559 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 LENG8Q96PV6 779 aaPredicted RBP10.05□□□□□ -0.8
C9orf43-201ENST00000288462 COPS8Q99627 209 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 MTG2Q9H4K7 406 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 MID1IP1Q9NPA3 183 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 PCDH12Q9NPG4 1184 aa10.05□□□□□ -0.8
C9orf43-201ENST00000288462 ELOVL2Q9NXB9 296 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms