RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 DLGAP4Q9Y2H0 992 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 REXO2Q9Y3B8 237 aaKnown RBP4.6□□□□□ -1.67
CD44-202ENST00000278385 SLC4A4Q9Y6R1 1079 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 LAMB2P55268 1798 aa4.6□□□□□ -1.67
CD44-202ENST00000278385 MANSC4A6NHS7 340 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 ZSCAN5BA6NJL1 495 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 SLC38A8A6NNN8 435 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 LDLRAD4O15165 306 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 GPR32O75388 356 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 IL1AP01583 271 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 COL1A1P02452 1464 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 AMHP03971 560 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 FAM86B2P0C5J1 330 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 SPATA31D3P0C874 917 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 RAP2AP10114 183 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 DLATP10515 647 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 TRIM21P19474 475 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 CPOXP36551 454 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 ABCG1P45844 678 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 OR1G1P47890 313 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 PTDSS1P48651 473 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 PDE1AP54750 535 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 VCPP55072 806 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 TIMM10P62072 90 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 ADAM8P78325 824 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CEBPZQ03701 1054 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 DDX39BQ13838 428 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 MVPQ14764 893 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 SGCBQ16585 318 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 PFKFB3Q16875 520 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 FUT11Q495W5 492 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 C1orf185Q5T7R7 199 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 ATAD3BQ5T9A4 648 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 FCRLBQ6BAA4 426 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 JADE1Q6IE81 842 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 APOBEC3HQ6NTF7 200 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 KLC3Q6P597 504 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 PSRC1Q6PGN9 363 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 PAPD4Q6PIY7 484 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 ZBED9Q6R2W3 1325 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 METAP1DQ6UB28 335 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 Q6ZSN1 163 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 SPATA31D4Q6ZUB0 917 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 MOB2Q70IA6 237 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 DOK3Q7L591 496 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 SPRED1Q7Z699 444 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 VASH2Q86V25 355 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CAND1Q86VP6 1230 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 WDR49Q8IV35 697 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 KLHL7Q8IXQ5 586 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 PTGR2Q8N8N7 351 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 MIPOL1Q8TD10 442 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 SLC2A12Q8TD20 617 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CHURC1Q8WUH1 139 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 TEKT4Q8WW24 435 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 EXTL1Q92935 676 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 DHX58Q96C10 678 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 C11orf24Q96F05 449 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 EEF2KMTQ96G04 330 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 DCLRE1CQ96SD1 692 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 GAD1Q99259 594 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 PAFAH2Q99487 392 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 SEMA3CQ99985 751 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 DDX50Q9BQ39 737 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 SRSF8Q9BRL6 282 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 EDEM2Q9BV94 578 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 KIFC3Q9BVG8 833 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CCSER1Q9C0I3 900 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 KCNH6Q9H252 994 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CARD9Q9H257 536 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 OSGEPL1Q9H4B0 414 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 TFB2MQ9H5Q4 396 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 LDAHQ9H6V9 325 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 TDRD3Q9H7E2 651 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 SYNPO2LQ9H987 977 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 NGBQ9NPG2 151 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 PRMT8Q9NR22 394 aaPredicted RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 ARL8BQ9NVJ2 186 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CFAP97Q9P2B7 532 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 XPR1Q9UBH6 696 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 TRPC4Q9UBN4 977 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 MAD2L2Q9UI95 211 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CD207Q9UJ71 328 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 ITGA11Q9UKX5 1188 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CCPG1Q9ULG6 757 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 STX8Q9UNK0 236 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 CDYLQ9Y232 598 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 RCE1Q9Y256 329 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 DRG1Q9Y295 367 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 STRAPQ9Y3F4 350 aaKnown RBP4.59□□□□□ -1.67
CD44-202ENST00000278385 PCDHAC2Q9Y5I4 1007 aa4.59□□□□□ -1.67
CD44-202ENST00000278385 TAF1P21675 1872 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SALL1Q9NSC2 1324 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 A0A087WV48 116 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 A0A1B0GUL7 405 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 KDM4EB2RXH2 506 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 TCP10L2B9ZVM9 353 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SOCS6O14544 535 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms