RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC7A2P52569 658 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 NFKB2Q00653 900 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 TSPY1Q01534 308 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 RALGDSQ12967 914 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 CYBRD1Q53TN4 286 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 GRASPQ7Z6J2 395 aaPredicted RBP10.26□□□□□ -0.77
UPF3B-201ENST00000276201 CUZD1Q86UP6 607 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 SLC41A1Q8IVJ1 513 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 DEFB106AQ8N104 65 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 SCAIQ8N9R8 606 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 PGAP3Q96FM1 320 aaPredicted RBP10.26□□□□□ -0.77
UPF3B-201ENST00000276201 RDH12Q96NR8 316 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 POLR1BQ9H9Y6 1135 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 CHRAC1Q9NRG0 131 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 SELENONQ9NZV5 590 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 SLC27A5Q9Y2P5 690 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 NOTCH4Q99466 2003 aa10.26□□□□□ -0.77
UPF3B-201ENST00000276201 TYW5A2RUC4 315 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CFAP99D6REC4 459 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 K7EPI3 171 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 NME4O00746 187 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 SOAT2O75908 522 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CLPXO76031 633 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 IPO13O94829 963 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 LRG1P02750 347 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GNAO1P09471 354 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ALOX5P09917 674 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GFAPP14136 432 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 NELFEP18615 380 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 PCSK1P29120 753 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 HOXD12P35452 270 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GRIA3P42263 894 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ARCN1P48444 511 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ATXN3P54252 364 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 STX1BP61266 288 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TWF1Q12792 350 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GRIK2Q13002 908 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 RBM48Q5RL73 367 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GPR107Q5VW38 600 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 C16orf87Q6PH81 154 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 KCTD8Q6ZWB6 473 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 DCP1BQ8IZD4 617 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CCNYL1Q8N7R7 359 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CLEC4CQ8WTT0 213 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 NRBF2Q96F24 287 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 PPP1R36Q96LQ0 422 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FAM49BQ9NUQ9 324 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ATAD3AQ9NVI7 634 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 DNMT3BQ9UBC3 853 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 PSME2Q9UL46 239 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 MAGED2Q9UNF1 606 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 VWA7Q9Y334 891 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FAM32AQ9Y421 112 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TCRBV5S2A0A599 114 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 SAC3D1A6NKF1 404 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TMEM233B4DJY2 109 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 F5H423 210 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FGF4P08620 206 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GABARAPL2P60520 117 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 PRAMEP78395 509 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ZNF846Q147U1 533 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 OXA1LQ15070 435 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FAM83EQ2M2I3 478 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FGD3Q5JSP0 725 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 AGAP9Q5VTM2 703 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 KIAA0930Q6ICG6 404 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CYP2R1Q6VVX0 501 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TMEM26Q6ZUK4 368 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TFAP2DQ7Z6R9 452 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FAM131BQ86XD5 332 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 FUNDC1Q8IVP5 155 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 SLC15A3Q8IY34 581 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 SFRP1Q8N474 314 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 BTN2A3PQ96KV6 586 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ZNF347Q96SE7 839 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TRIM54Q9BYV2 358 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 NANOGQ9H9S0 305 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 TMEM165Q9HC07 324 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CRTAC1Q9NQ79 661 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ABI2Q9NYB9 513 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 GTSE1Q9NYZ3 720 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CDH9Q9ULB4 789 aa10.25□□□□□ -0.77
UPF3B-201ENST00000276201 AAR2Q9Y312 384 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
UPF3B-201ENST00000276201 CCDC78A2IDD5 438 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 MYBPHLA2RUH7 354 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 A8MT66 165 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GOLGA8TH3BQL2 631 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 WISP3O95389 354 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 BCL10O95999 233 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ERCC2P18074 760 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 NFKB1P19838 968 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 IMPDH1P20839 514 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ADRA1BP35368 520 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 SMARCB1Q12824 385 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 NR1D2Q14995 579 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 BROXQ5VW32 411 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms