RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TMX2-CTNND1H3BSU7 103 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 EFSO43281 561 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 SNX2O60749 519 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 PRAMEF10O60809 474 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 CPNE6O95741 557 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 GPR89BP0CG08 455 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 CCL4P13236 92 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 MPSTP25325 297 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 SPAM1P38567 509 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
HMGN3-201ENST00000275036 GPR3P46089 330 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 ARSDP51689 593 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 TMPRSS3P57727 454 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 SPARCL1Q14515 664 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 TGIF1Q15583 401 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 PHF19Q5T6S3 580 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 IYDQ6PHW0 289 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 FAM151BQ6UXP7 276 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 C11orf96Q7Z7L8 435 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 FAM71DQ8N9W8 422 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 SLC35B2Q8TB61 432 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 DTX3LQ8TDB6 740 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 CCDC74BQ96LY2 380 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 FERMT1Q9BQL6 677 aa14.23□□□□□ -0.13
HMGN3-201ENST00000275036 SCHIP1Q9P0W5 487 aaPredicted RBP14.23□□□□□ -0.13
HMGN3-201ENST00000275036 CFAP46Q8IYW2 2715 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 TEX51A0A1B0GUA7 166 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 GOLGA6L9A6NEM1 432 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 ATXN7O15265 892 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-201ENST00000275036 ARHGAP6O43182 974 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 VEGFDO43915 354 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 STK10O94804 968 aaKnown RBP14.22□□□□□ -0.13
HMGN3-201ENST00000275036 CDK14O94921 469 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 METTL18O95568 372 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 F3P13726 295 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 ZNF7P17097 686 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-201ENST00000275036 CLCNKAP51800 687 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 TMEM115Q12893 351 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-201ENST00000275036 BIRC2Q13490 618 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 KCTD11Q693B1 232 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 MICALCLQ6ZW33 695 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 PIM3Q86V86 326 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 LRRTM4Q86VH4 590 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 JAMLQ86YT9 394 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 TTC13Q8NBP0 860 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 SNRNP27Q8WVK2 155 aaKnown RBP14.22□□□□□ -0.13
HMGN3-201ENST00000275036 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 TBL1YQ9BQ87 522 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 TMEM121Q9BTD3 319 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 TSGA10Q9BZW7 698 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 KCNK4Q9NYG8 393 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 ACSL6Q9UKU0 697 aa14.22□□□□□ -0.13
HMGN3-201ENST00000275036 AAR2Q9Y312 384 aaKnown RBP14.22□□□□□ -0.13
HMGN3-201ENST00000275036 GLYATL1P3A0A0U1RQE8 302 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 KMOO15229 486 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 KRT86O43790 486 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
HMGN3-201ENST00000275036 JMJD7P0C870 316 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 THRAP10827 490 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 CTSCP53634 463 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 LIMK2P53671 638 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 MAPK10P53779 464 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 HHEXQ03014 270 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 NFATC2Q13469 925 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 SQSTM1Q13501 440 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 PRPSAP1Q14558 356 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 TAF1AQ15573 450 aaPredicted RBP14.21□□□□□ -0.13
HMGN3-201ENST00000275036 INSCQ1MX18 579 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 BROXQ5VW32 411 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 ZFAND4Q86XD8 727 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 LRRC8AQ8IWT6 810 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 RASGEF1AQ8N9B8 481 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 DDHD1Q8NEL9 900 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 OR4K2Q8NGD2 314 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 OR13C4Q8NGS5 318 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 GDAP1Q8TB36 358 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 USP7Q93009 1102 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 TIMM29Q9BSF4 260 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 OSGEPL1Q9H4B0 414 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 SARS2Q9NP81 518 aaKnown RBP14.21□□□□□ -0.13
HMGN3-201ENST00000275036 FKBPLQ9UIM3 349 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 DNAJC16Q9Y2G8 782 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 PKP3Q9Y446 797 aa14.21□□□□□ -0.13
HMGN3-201ENST00000275036 KIR2DS5A0A0G2JLQ3 304 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 A0A0G2JNG1 304 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 K7ENP7 123 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 KIR2DS3K7RE56 304 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 NVLO15381 856 aaKnown RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 FGF3P11487 239 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 BRAFP15056 766 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 LPOP22079 712 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 UCNP55089 124 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 UBE2IP63279 158 aaKnown RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CCZ1BP86790 482 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CCZ1P86791 482 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 XIAPP98170 497 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 VAC14Q08AM6 782 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms