RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PRR5-ARHGAP8B1AHC4 643 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TFECO14948 347 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 CLDN9O95484 217 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ANXA2P07355 339 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ZSCAN5DPP0CG00 497 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SAGP10523 405 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RORCP51449 518 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ARHGAP8P85298 464 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 BLMHQ13867 455 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 FARSBQ9NSD9 589 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 KLRC4O43908 158 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SNX4O95219 450 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SSR2P43308 183 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PDX1P52945 283 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ADGRE1Q14246 886 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ACAP2Q15057 778 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 EGFLAMQ63HQ2 1017 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TCEAL6Q6IPX3 200 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF548Q8NEK5 533 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 CLDN25C9JDP6 229 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 PQBP1O60828 265 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 SCGNO76038 276 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 WNT3AP56704 352 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 C6orf52Q5T4I8 152 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 CXorf57Q6NSI4 855 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 MPP5Q8N3R9 675 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TWIST2Q8WVJ9 160 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF558Q96NG5 402 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TCF25Q9BQ70 676 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ANKRD63C9JTQ0 380 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TNFRSF11BO00300 401 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 AIREO43918 545 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 STK16O75716 305 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ANGPTL1O95841 491 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 ADH1AP07327 375 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 NDUFA9Q16795 377 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 INTS6LQ5JSJ4 861 aaKnown RBP7.92□□□□□ -1.14
LIMD1-201ENST00000273317 DCST1Q5T197 706 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 AHSA2Q719I0 299 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 HDAC10Q969S8 669 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 RAD51AP1Q96B01 352 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 TAMM41Q96BW9 452 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 AIFM2Q9BRQ8 373 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 DNAJB4Q9UDY4 337 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 GPSM3Q9Y4H4 160 aa7.92□□□□□ -1.14
LIMD1-201ENST00000273317 GRM6O15303 877 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GJB6O95452 261 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 AP2A1O95782 977 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SPAM1P38567 509 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SUZ12Q15022 739 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ADGRD1Q6QNK2 874 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GSTCDQ8NEC7 633 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 FAM163AQ96GL9 167 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 LGMNQ99538 433 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 EXO5Q9H790 373 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 TIMM13Q9Y5L4 95 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 COLEC10Q9Y6Z7 277 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NAV1Q8NEY1 1877 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GLYATL1P3A0A0U1RQE8 302 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 RBMXL2O75526 392 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ABCG1P45844 678 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 UBE2R2Q712K3 238 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ALG2Q9H553 416 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ZDHHC4Q9NPG8 344 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 KIAA1522Q9P206 1035 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SPATA31C2B4DYI2 1134 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PLOD2O00469 737 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NOMO3P69849 1222 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ABRQ12979 859 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 KLF10Q13118 480 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 HECTD2Q5U5R9 776 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 DEFB128Q7Z7B8 93 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 MON1AQ86VX9 555 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 RAVER1Q8IY67 606 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF563Q8TA94 476 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NKD2Q969F2 451 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PGLYRP2Q96PD5 576 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 AGAP2Q99490 1192 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 TBC1D3BA6NDS4 549 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 MPSTP25325 297 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PIK3CBP42338 1070 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF155Q12901 538 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PYHIN1Q6K0P9 492 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NODALQ96S42 347 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 COPS4Q9BT78 406 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 AGO3Q9H9G7 860 aaKnown RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SLC15A5A6NIM6 579 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SP100P23497 879 aaPredicted RBP7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GTF2H2Q13888 395 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 IKBKEQ14164 716 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 PLA2G4EQ3MJ16 856 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 GTF2H2CQ6P1K8 395 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SLC9A6Q92581 669 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 NXNL1Q96CM4 212 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 MCMBPQ9BTE3 642 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 MRIQ9BWK5 157 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SLC22A4Q9H015 551 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 SLC17A7Q9P2U7 560 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 TBC1D24Q9ULP9 559 aa7.91□□□□□ -1.14
LIMD1-201ENST00000273317 CFL2Q9Y281 166 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms