RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ANKRD46Q86W74 232 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 SELENOMQ8WWX9 145 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 SMIM14Q96QK8 99 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 CXorf21Q9HAI6 301 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 UBAP1Q9NZ09 502 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 PRMT5O14744 637 aaPredicted RBP19.66■□□□□ 0.74
CSPG5-201ENST00000264723 MAPKAPK3Q16644 382 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 AP5B1Q2VPB7 878 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 HSPBAP1Q96EW2 488 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 MRPS23Q9Y3D9 190 aaKnown RBP19.66■□□□□ 0.74
CSPG5-201ENST00000264723 UBR3Q6ZT12 1888 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 MTMR11A4FU01 709 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 SLC7A1P30825 629 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 PRKCQQ04759 706 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 CHSY3Q70JA7 882 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 DNAJB7Q7Z6W7 309 aaPredicted RBP19.66■□□□□ 0.74
CSPG5-201ENST00000264723 CILP2Q8IUL8 1156 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 ATG16L2Q8NAA4 619 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 SLAIN1Q8ND83 568 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 RERGLQ9H628 205 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 TMEM30AQ9NV96 361 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 GJD2Q9UKL4 321 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 BLOC1S6Q9UL45 172 aa19.66■□□□□ 0.74
CSPG5-201ENST00000264723 CAPN1P07384 714 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 OR56A5P0C7T3 313 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 CLK1P49759 484 aaKnown RBP19.65■□□□□ 0.74
CSPG5-201ENST00000264723 CCT8P50990 548 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 UFM1P61960 85 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 MTA1Q13330 715 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 HORMAD1Q86X24 394 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 STK40Q8N2I9 435 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 MCOLN3Q8TDD5 553 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 GIPC3Q8TF64 312 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 MAGEH1Q9H213 219 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 PTTG2Q9NZH5 202 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 CD84Q9UIB8 345 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 SLC7A4O43246 635 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 ADH1AP07327 375 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 POLR2JP52435 117 aaKnown RBP19.65■□□□□ 0.74
CSPG5-201ENST00000264723 TUBB3Q13509 450 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 BNIPLQ7Z465 357 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 GALNT5Q7Z7M9 940 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 C2CD4AQ8NCU7 369 aaPredicted RBP19.65■□□□□ 0.74
CSPG5-201ENST00000264723 ING5Q8WYH8 240 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 DPF3Q92784 378 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 TSSK3Q96PN8 268 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 CERS4Q9HA82 394 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 EXD2Q9NVH0 621 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 LINC00854A0A1B0GVQ3 168 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 TBC1D3BA6NDS4 549 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 NOBOXO60393 691 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 SLC25A14O95258 325 aaPredicted RBP19.65■□□□□ 0.74
CSPG5-201ENST00000264723 UGT1A1P22309 533 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 UGT1A4P22310 534 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 ADSLP30566 484 aaPredicted RBP19.65■□□□□ 0.74
CSPG5-201ENST00000264723 UGT1A3P35503 534 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 UGT1A5P35504 534 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 ABRQ12979 859 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 LCP2Q13094 533 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 NUDT18Q6ZVK8 323 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 TAGAPQ8N103 731 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 VPS37AQ8NEZ2 397 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 ELMO1Q92556 727 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 MYO19Q96H55 970 aa19.65■□□□□ 0.74
CSPG5-201ENST00000264723 A0A1W2PRU2 124 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 ZNF623O75123 536 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 CST1P01037 141 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 DGKAP23743 735 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 HERVK_113P63132 956 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 PGM2L1Q6PCE3 622 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 LILRA2Q8N149 483 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 HOPXQ9BPY8 73 aaPredicted RBP19.64■□□□□ 0.74
CSPG5-201ENST00000264723 CHID1Q9BWS9 393 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 ERVK-6Q9BXR3 956 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 HCSTQ9UBK5 93 aa19.64■□□□□ 0.74
CSPG5-201ENST00000264723 DOCK5Q9H7D0 1870 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 MGAT4DA6NG13 374 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 GJB5O95377 273 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 PABPC4LP0CB38 370 aaKnown RBP19.64■□□□□ 0.73
CSPG5-201ENST00000264723 SPIDRQ14159 915 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 OGFRL1Q5TC84 451 aaPredicted RBP19.64■□□□□ 0.73
CSPG5-201ENST00000264723 FAM91A1Q658Y4 838 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 ZNF598Q86UK7 904 aaKnown RBP19.64■□□□□ 0.73
CSPG5-201ENST00000264723 BRSK1Q8TDC3 778 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 TPD52L3Q96J77 140 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 ZSCAN9O15535 394 aaPredicted RBP19.64■□□□□ 0.73
CSPG5-201ENST00000264723 PRAMEF1O95521 474 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 IRF8Q02556 426 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 DMC1Q14565 340 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 TECRLQ5HYJ1 363 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 ZNF621Q6ZSS3 439 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 ADGRG6Q86SQ4 1221 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 PLD3Q8IV08 490 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 IGSF8Q969P0 613 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 LRRC58Q96CX6 371 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 CDKN2AIPNLQ96HQ2 116 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 COPS8Q99627 209 aa19.64■□□□□ 0.73
CSPG5-201ENST00000264723 SLC10A3P09131 477 aa19.63■□□□□ 0.73
CSPG5-201ENST00000264723 ALPIP09923 528 aa19.63■□□□□ 0.73
CSPG5-201ENST00000264723 CDH4P55283 916 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms