RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 GRIK4Q16099 956 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 ZNF438Q7Z4V0 828 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 CAMK1DQ8IU85 385 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 OR10Z1Q8NGY1 313 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 PROX1Q92786 737 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 LPPQ93052 612 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 SH3KBP1Q96B97 665 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 REXO5Q96IC2 774 aaKnown RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 FBXL20Q96IG2 436 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 ALG9Q9H6U8 611 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 MRPS7Q9Y2R9 242 aaKnown RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 ISPDA4D126 451 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 PROZP22891 400 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 AFF1P51825 1210 aaKnown RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 TAS2R39P59534 338 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 DBPQ10586 325 aaPredicted RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 PPP1R8Q12972 351 aaKnown RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 ACAP2Q15057 778 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 ZNF789Q5FWF6 425 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 CORO6Q6QEF8 472 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 PAGE2Q7Z2X7 111 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 CLYBLQ8N0X4 340 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 SFRP1Q8N474 314 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 SHCBP1Q8NEM2 672 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 PJA1Q8NG27 643 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 LHFPL5Q8TAF8 219 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 C1orf74Q96LT6 269 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 UROC1Q96N76 676 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 IFT80Q9P2H3 777 aaPredicted RBP14.07□□□□□ -0.16
SCARF1-201ENST00000263071 GJD2Q9UKL4 321 aa14.07□□□□□ -0.16
SCARF1-201ENST00000263071 SOCS2O14508 198 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 NDST3O95803 873 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 IFNA16P05015 189 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 MYF6P23409 242 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 POLR2GP62487 172 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 IL1RL1Q01638 556 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 GHRHRQ02643 423 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SDHAF4Q5VUM1 108 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 BROXQ5VW32 411 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 CHSY3Q70JA7 882 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SPPL2CQ8IUH8 684 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 ADGRG5Q8IZF4 528 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 MCCC2Q9HCC0 563 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 FZD10Q9ULW2 581 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 WBP11Q9Y2W2 641 aaKnown RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 RAP2CQ9Y3L5 183 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 ZNF831Q5JPB2 1677 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 LRRC14BA6NHZ5 514 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 ZNF195O14628 629 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 UBDO15205 165 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 YES1P07947 543 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 NCK1P16333 377 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SOX4Q06945 474 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 PIGGQ5H8A4 983 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SPANXN3Q5MJ09 141 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 LIPMQ5VYY2 423 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 C9orf57Q5W0N0 161 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 ERAP2Q6P179 960 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 GPRIN1Q7Z2K8 1008 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 FAM35AQ86V20 835 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 DNAJB14Q8TBM8 379 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SLC16A10Q8TF71 515 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 PBXIP1Q96AQ6 731 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 LRCH3Q96II8 777 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 KLHL5Q96PQ7 755 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 KCTD14Q9BQ13 255 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 LHPPQ9H008 270 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 GPBP1L1Q9HC44 474 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 FAM105AQ9NUU6 356 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 DUS2Q9NX74 493 aaKnown RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 OR5K4A6NMS3 321 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 I3L521 148 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 PPP6CO00743 305 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 MRASO14807 208 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SYNCRIPO60506 623 aaKnown RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 TADA2AO75478 443 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 KCNA5P22460 613 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 IL12RB1P42701 662 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 HCAR3P49019 387 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 TARDBPQ13148 414 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 GRM1Q13255 1194 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 ARSKQ6UWY0 536 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 AGMOQ6ZNB7 445 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 PDZD4Q76G19 769 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-201ENST00000263071 SLC26A9Q7LBE3 791 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 RIOX2Q8IUF8 465 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 DHRSXQ8N5I4 330 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 HEXDCQ8WVB3 486 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 IGSF5Q9NSI5 407 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 EMC3Q9P0I2 261 aa14.06□□□□□ -0.16
SCARF1-201ENST00000263071 UBA6A0AVT1 1052 aaPredicted RBP14.05□□□□□ -0.16
SCARF1-201ENST00000263071 MYBPHLA2RUH7 354 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms