RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 KLF15Q9UIH9 416 aa11.47□□□□□ -0.57
PFDN1-201ENST00000261813 RIMKLBQ9ULI2 386 aa11.47□□□□□ -0.57
PFDN1-201ENST00000261813 PKP3Q9Y446 797 aa11.47□□□□□ -0.57
PFDN1-201ENST00000261813 TMEM131Q92545 1883 aa11.47□□□□□ -0.57
PFDN1-201ENST00000261813 LAMA1P25391 3075 aa11.47□□□□□ -0.57
PFDN1-201ENST00000261813 KMT2BQ9UMN6 2715 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CCDC78A2IDD5 438 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 MROH6A6NGR9 719 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CACNB4O00305 520 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CCL22O00626 93 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 INPP4BO15327 924 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 GPR39O43194 453 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 AVILO75366 819 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 USP1O94782 785 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 PYGLP06737 847 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 MYCLP1P12525 358 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 MGAT1P26572 445 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CA5AP35218 305 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 PI4KAP42356 2102 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 RXRGP48443 463 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CCT8P50990 548 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 LIMK1P53667 647 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 TMPRSS15P98073 1019 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 IFFO1Q0D2I5 559 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 ILF2Q12905 390 aaKnown RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 PTK2BQ14289 1009 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CHRNA6Q15825 494 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 SPANXN3Q5MJ09 141 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 STPG1Q5TH74 334 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 ZDHHC20Q5W0Z9 365 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 FAM151BQ6UXP7 276 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 IQCKQ8N0W5 287 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 OXR1Q8N573 874 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CDKL2Q92772 493 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 PDXPQ96GD0 296 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 C9orf72Q96LT7 481 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 PWWP2AQ96N64 755 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 ZSCAN5AQ9BUG6 496 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 KIFC1Q9BW19 673 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 SPATA16Q9BXB7 569 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 FUT8Q9BYC5 575 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 ROPN1BQ9BZX4 212 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 TCEAL2Q9H3H9 227 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 VPS37BQ9H9H4 285 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 LRRC4CQ9HCJ2 640 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 FGF22Q9HCT0 170 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 PHPT1Q9NRX4 125 aaPredicted RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 TM7SF3Q9NS93 570 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 NINJ2Q9NZG7 142 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 FETUBQ9UGM5 382 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 TMPRSS11EQ9UL52 423 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 SOX13Q9UN79 622 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 CHMP2BQ9UQN3 213 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 TCAF1Q9Y4C2 921 aa11.46□□□□□ -0.57
PFDN1-201ENST00000261813 OAS3Q9Y6K5 1087 aaKnown RBP11.46□□□□□ -0.57
PFDN1-201ENST00000261813 GLYATL1P3A0A0U1RQE8 302 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 GOLGA6L10A6NI86 522 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 MAP2K7O14733 419 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 OPA1O60313 960 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 FUCA1P04066 466 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 CSF2P04141 144 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 CEACAM5P06731 702 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 ZNF883P0CG24 379 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 NME1P15531 152 aaKnown RBP11.45□□□□□ -0.58
PFDN1-201ENST00000261813 PSMA3P25788 255 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 HTR1BP28222 390 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 EPHA8P29322 1005 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-201ENST00000261813 POLD2P49005 469 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 ARRB1P49407 418 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-201ENST00000261813 CRADDP78560 199 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 XIAPP98170 497 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 BNIP3Q12983 259 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 PEX6Q13608 980 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 SLC29A2Q14542 456 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 SKIDA1Q1XH10 827 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 ALG11Q2TAA5 492 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 KLHL38Q2WGJ6 581 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 UAP1L1Q3KQV9 507 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 ATP13A5Q4VNC0 1218 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 TSTD2Q5T7W7 516 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 PDPK2PQ6A1A2 396 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 TMEM135Q86UB9 458 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 ANKMY2Q8IV38 441 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 RBFAQ8N0V3 343 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 GOLGA6L1Q8N7Z2 621 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 OR56A4Q8NGH8 313 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 GSDMBQ8TAX9 411 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 DTX3LQ8TDB6 740 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 STYXQ8WUJ0 223 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 OR1E3Q8WZA6 343 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 TSACCQ96A04 125 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-201ENST00000261813 HIC2Q96JB3 615 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 ZNF778Q96MU6 729 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 VPS35Q96QK1 796 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 CYTH2Q99418 400 aa11.45□□□□□ -0.58
PFDN1-201ENST00000261813 MRPL40Q9NQ50 206 aaKnown RBP11.45□□□□□ -0.58
PFDN1-201ENST00000261813 NLE1Q9NVX2 485 aaPredicted RBP11.45□□□□□ -0.58
PFDN1-201ENST00000261813 DNAJC28Q9NX36 388 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms