RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 KLF10Q13118 480 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TAC4Q86UU9 113 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 ANKRD46Q86W74 232 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 GALNT13Q8IUC8 556 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 CROCCP3Q8IVE0 287 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 ARL14EPQ8N8R7 260 aaPredicted RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 DQX1Q8TE96 717 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 PCED1BQ96HM7 432 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 B3GALT6Q96L58 329 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TEFMQ96QE5 360 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 GTF2IRD1Q9UHL9 959 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 PSMD9O00233 223 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 MT-CYBP00156 380 aaPredicted RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 NCK1P16333 377 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TPSB2P20231 275 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 GNPDA1P46926 289 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 CDK9P50750 372 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 ABATP80404 500 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TPSAB1Q15661 275 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TSC22D1Q15714 1073 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 ATXN7L2Q5T6C5 722 aaPredicted RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 PGBD2Q6P3X8 592 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 TAF8Q7Z7C8 310 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 SLCO6A1Q86UG4 719 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 GPR135Q8IZ08 494 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 RPL10LQ96L21 214 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 CYP2S1Q96SQ9 504 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 GPER1Q99527 375 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 KCND1Q9NSA2 647 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 DHRS7Q9Y394 339 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 OAS3Q9Y6K5 1087 aaKnown RBP12.01□□□□□ -0.49
COL8A1-201ENST00000261037 AK5Q9Y6K8 562 aa12.01□□□□□ -0.49
COL8A1-201ENST00000261037 SLIT3O75094 1523 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 BBIP1A8MTZ0 92 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 TFECO14948 347 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 OR1F1O43749 312 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 CLDN9O95484 217 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 FGF19O95750 216 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 PRKAR1AP10644 381 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ATXN1P54253 815 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 IL18Q14116 193 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 LDLRAP1Q5SW96 308 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF567Q8N184 647 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF433Q8N7K0 673 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 UBR7Q8N806 425 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 C1orf127Q8N9H9 656 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 C11orf16Q9NQ32 467 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 PRDM8Q9NQV8 689 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 PRPF19Q9UMS4 504 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 PRMT5O14744 637 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 SMPD1P17405 629 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ACLYP53396 1101 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 CAMK1Q14012 370 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 SNAPC1Q16533 368 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 IL23RQ5VWK5 629 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 PAOXQ6QHF9 649 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ZYG11AQ6WRX3 759 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 C1GALT1C1Q96EU7 318 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 DSN1Q9H410 356 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 MRPS33Q9Y291 106 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 PCDHB1Q9Y5F3 818 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 BAZ2BQ9UIF8 2168 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 H7C0S8 307 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 GPR25O00155 361 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 RBMXL2O75526 392 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 IGFBP5P24593 272 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 LMO2P25791 158 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ZDHHC20Q5W0Z9 365 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 SLC24A5Q71RS6 500 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 GPR65Q8IYL9 337 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 SLC4A11Q8NBS3 891 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 MFSD3Q96ES6 412 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 COX4I2Q96KJ9 171 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 NMUR2Q9GZQ4 415 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 PIGUQ9H490 435 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 DNAJC28Q9NX36 388 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 SEPT4O43236 478 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 UGT2B11O75310 529 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 LRCH4O75427 683 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 F7P08709 466 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 ANXA4P09525 319 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 MMP8P22894 467 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 CDKN2BP42772 138 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 STARP49675 285 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ARFIP1P53367 373 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 DRG2P55039 364 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 RIPK1Q13546 671 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 SERPINA9Q86WD7 417 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 FAM81AQ8TBF8 368 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 CLEC4CQ8WTT0 213 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 AP3S1Q92572 193 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
COL8A1-201ENST00000261037 MAML3Q96JK9 1138 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 INPP4AQ96PE3 977 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 GAL3ST4Q96RP7 486 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms