RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 HCAR2Q8TDS4 363 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 HEXDCQ8WVB3 486 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 UBXN10Q96LJ8 280 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 TSNARE1Q96NA8 513 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 TSSK1BQ9BXA7 367 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 UNKQ9C0B0 810 aaKnown RBP17.3■□□□□ 0.36
SRSF1-201ENST00000258962 DUSP15Q9H1R2 295 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-201ENST00000258962 POPDC3Q9HBV1 291 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 PCDH12Q9NPG4 1184 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 ITM2CQ9NQX7 267 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 APPL1Q9UKG1 709 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 SARDHQ9UL12 918 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 VPS9D1Q9Y2B5 631 aa17.3■□□□□ 0.36
SRSF1-201ENST00000258962 CKAP5Q14008 2032 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 SPAG17Q6Q759 2223 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 GLYATL1P3A0A0U1RQE8 302 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 C16orf96A6NNT2 1141 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 KIAA0754O94854 1291 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 IL1BP01584 269 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 DNTTP04053 509 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 APOA4P06727 396 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-201ENST00000258962 VIPR1P32241 457 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 METAP1P53582 386 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 ZBTB16Q05516 673 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 NFATC2Q13469 925 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CSHL1Q14406 222 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CHRNA6Q15825 494 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 TSNAXIP1Q2TAA8 658 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 POM121L1PQ3SYA9 428 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 PARS2Q7L3T8 475 aaKnown RBP17.29■□□□□ 0.36
SRSF1-201ENST00000258962 SPATA21Q7Z572 469 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 SNX20Q7Z614 316 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CCDC91Q7Z6B0 441 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 TBC1D1Q86TI0 1168 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CACUL1Q86Y37 369 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CCDC197Q8NCU1 140 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CCDC97Q96F63 343 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-201ENST00000258962 P2RY12Q9H244 342 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 CPSF2Q9P2I0 782 aaKnown RBP17.29■□□□□ 0.36
SRSF1-201ENST00000258962 XPR1Q9UBH6 696 aa17.29■□□□□ 0.36
SRSF1-201ENST00000258962 NDUFS2O75306 463 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 SNNO75324 88 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-201ENST00000258962 LTA4HP09960 611 aaKnown RBP17.28■□□□□ 0.36
SRSF1-201ENST00000258962 CCDC166P0CW27 439 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 CYP2A6P11509 494 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-201ENST00000258962 UGT1A6P19224 532 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 ITGALP20701 1170 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 BCKDHBP21953 392 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 UGT1A1P22309 533 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 UGT1A4P22310 534 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 OXTRP30559 389 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 UGT1A3P35503 534 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 UGT1A5P35504 534 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 PTGER3P43115 390 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 SFSWAPQ12872 951 aaKnown RBP17.28■□□□□ 0.36
SRSF1-201ENST00000258962 RALGDSQ12967 914 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 ATG16L1Q676U5 607 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 ZYG11AQ6WRX3 759 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 CERS6Q6ZMG9 384 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 SERPINA9Q86WD7 417 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 ABCA7Q8IZY2 2146 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 FRMD1Q8N878 549 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 OR6Y1Q8NGX8 325 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 RDH11Q8TC12 318 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 OR8D1Q8WZ84 308 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 SCYL1Q96KG9 808 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 FAM129BQ96TA1 746 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 C20orf27Q9GZN8 174 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 RSPH9Q9H1X1 276 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-201ENST00000258962 ASB8Q9H765 288 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 ZNF395Q9H8N7 513 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-201ENST00000258962 PPM1HQ9ULR3 514 aa17.28■□□□□ 0.36
SRSF1-201ENST00000258962 IGHV1OR15-9A0A0B4J2B8 117 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 AGAP14A8MT82 685 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 KPNA3O00505 521 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 PFDN6O15212 129 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 PRNPP04156 253 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 PKMP14618 531 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 ZNF30P17039 623 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 CD6P30203 668 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 SLC26A3P40879 764 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 SPINT3P49223 89 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 DHPSP49366 369 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 TPMTP51580 245 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 ADARP55265 1226 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 RPS14P62263 151 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 OCRLQ01968 901 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 RPL6Q02878 288 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 OVGP1Q12889 678 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 ELAVL3Q14576 367 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 TTC31Q49AM3 519 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 TECRLQ5HYJ1 363 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 PMS2CLQ68D20 193 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 C6orf89Q6UWU4 347 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 DPPA4Q7L190 304 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 DSG4Q86SJ6 1040 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 TMIEQ8NEW7 156 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 GANCQ8TET4 914 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms