RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C5orf34Q96MH7 638 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 NIFKQ9BYG3 293 aaKnown RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 CLUHO75153 1309 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 CPSF4LA6NMK7 179 aaKnown RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 DUSP11O75319 330 aaKnown RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 OR4F21O95013 312 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 GNRH1P01148 92 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 CACNG1Q06432 222 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC10A6Q3KNW5 377 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 ABCB8Q9NUT2 735 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 RPTORQ8N122 1335 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 IGLV3-22A0A075B6J6 115 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 OMPP47874 163 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 GALNT13Q8IUC8 556 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM83DQ9H4H8 585 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 ABCB9Q9NP78 766 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 MGRN1O60291 552 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 STK16O75716 305 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 SNUPNO95149 360 aaKnown RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 C22orf31O95567 290 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 AP2A1O95782 977 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 CES1P23141 567 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 AIF1P55008 147 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 C6orf52Q5T4I8 152 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 UGT1A9O60656 530 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 ANXA4P09525 319 aaPredicted RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 GDF6Q6KF10 455 aaPredicted RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 DEPDC4Q8N2C3 294 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 GAL3ST4Q96RP7 486 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 UGT1A7Q9HAW7 530 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 UGT1A10Q9HAW8 530 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 UGT1A8Q9HAW9 530 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 WRAP73Q9P2S5 460 aaPredicted RBP18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 NR2E1Q9Y466 385 aa18.55■□□□□ 0.56
SMARCC1-201ENST00000254480 OR51F1A6NGY5 319 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 INSIG1O15503 277 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CAPN8A6NHC0 703 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 IDSP22304 550 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 PSMD4P55036 377 aaKnown RBP18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 GTF2H2Q13888 395 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 ATAT1Q5SQI0 421 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 GTF2H2CQ6P1K8 395 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 TMEM220Q6QAJ8 160 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 PAOXQ6QHF9 649 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC26A9Q7LBE3 791 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 KRT74Q7RTS7 529 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 RASGEF1CQ8N431 466 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 FBXO22Q8NEZ5 403 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 DIABLOQ9NR28 239 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 IKZF2Q9UKS7 526 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 TCAF1Q9Y4C2 921 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 LGR5O75473 907 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CDH3P22223 829 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 FKBP1BP68106 108 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 PPP1R15BQ5SWA1 713 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CXorf57Q6NSI4 855 aaKnown RBP18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 SFRP1Q8N474 314 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF781Q8N8C0 355 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 STYXQ8WUJ0 223 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 GPC6Q9Y625 555 aaPredicted RBP18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 SYN1P17600 705 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 MYL9P24844 172 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CLCQ05315 142 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 FSTL4Q6MZW2 842 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CDH24Q86UP0 819 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF366Q8N895 744 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 RTL3Q8N8U3 475 aaKnown RBP18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CTPS2Q9NRF8 586 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 SEMA3GQ9NS98 782 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 DGKBQ9Y6T7 804 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 SLC38A8A6NNN8 435 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 TAF4O00268 1085 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CHRNB2P17787 502 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 KIR3DL1P43629 444 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 NPAS4Q8IUM7 802 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 AADATQ8N5Z0 425 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 RBM15BQ8NDT2 890 aaKnown RBP18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 RACGAP1Q9H0H5 632 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 TMEM51Q9NW97 253 aa18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMARCC1-201ENST00000254480 CLDN9O95484 217 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 SMIM11AP58511 58 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 HID1Q8IV36 788 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 GPR65Q8IYL9 337 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 PMM1Q92871 262 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 GAS2L1Q99501 681 aaPredicted RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 MAPRE3Q9UPY8 281 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TMA7Q9Y2S6 64 aaKnown RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 GNB5O14775 395 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TFECO14948 347 aaPredicted RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 SNAP91O60641 907 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TPSB2P20231 275 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 CCT3P49368 545 aaKnown RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TPSAB1Q15661 275 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 LDLRAP1Q5SW96 308 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 PEG10Q86TG7 708 aaKnown RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 LIX1Q8N485 282 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 A0A1W2PRU2 124 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 NFATC1O95644 943 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 STATHP02808 62 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms