RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PACSIN1Q9BY11 444 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 BRD8Q9H0E9 1235 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 APMAPQ9HDC9 416 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 HAUS2Q9NVX0 235 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 PKD2L2Q9NZM6 624 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 OGFRQ9NZT2 677 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 ATXN10Q9UBB4 475 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 CPNE7Q9UBL6 633 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 ZNHIT2Q9UHR6 403 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 LUC7L2Q9Y383 392 aaKnown RBP10.18□□□□□ -0.78
VPS50-201ENST00000251739 SEC16AO15027 2179 aa10.18□□□□□ -0.78
VPS50-201ENST00000251739 LOC101059948A0A1B0GTJ6 334 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ARHGAP6O43182 974 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 GRID2O43424 1007 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 SPTBP11277 2137 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ZNF8P17098 575 aaPredicted RBP10.17□□□□□ -0.78
VPS50-201ENST00000251739 KDELR1P24390 212 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 SSR1P43307 286 aaKnown RBP10.17□□□□□ -0.78
VPS50-201ENST00000251739 GFERP55789 205 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 UBASH3AP57075 661 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ABHD18Q0P651 414 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 CDC20Q12834 499 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 NFATC2Q13469 925 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 MAP7Q14244 749 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 SLC18A3Q16572 532 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ZNF569Q5MCW4 686 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 CEACAM20Q6UY09 585 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ADGRG6Q86SQ4 1221 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 SLC9B2Q86UD5 537 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 PHYKPLQ8IUZ5 450 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ZNF547Q8IVP9 402 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 NCSTNQ92542 709 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 AHCYL2Q96HN2 611 aaKnown RBP10.17□□□□□ -0.78
VPS50-201ENST00000251739 CATSPER2Q96P56 530 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 PLEKHG4BQ96PX9 1271 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 CTRCQ99895 268 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ZSCAN5AQ9BUG6 496 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 TBC1D10AQ9BXI6 508 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 ADGRE3Q9BY15 652 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.17□□□□□ -0.78
VPS50-201ENST00000251739 OR2AG1Q9H205 316 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 STN1Q9H668 368 aaKnown RBP10.17□□□□□ -0.78
VPS50-201ENST00000251739 PRDM8Q9NQV8 689 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 SCHIP1Q9P0W5 487 aaPredicted RBP10.17□□□□□ -0.78
VPS50-201ENST00000251739 CTTNBP2NLQ9P2B4 639 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 SLC23A2Q9UGH3 650 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 TMPRSS11EQ9UL52 423 aa10.17□□□□□ -0.78
VPS50-201ENST00000251739 MED13Q9UHV7 2174 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CLEC18AA5D8T8 446 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 GOLGA6L3A6NEY3 463 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 A8MU76 341 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TOX3O15405 576 aaPredicted RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 NKX2-8O15522 239 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 STK17BO94768 372 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 MTA2O94776 668 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 H2AFZP0C0S5 128 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TMEM253P0C7T8 217 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 BRAFP15056 766 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 XRCC1P18887 633 aaPredicted RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 MAP4P27816 1152 aaKnown RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 OAS2P29728 719 aaKnown RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 CASP14P31944 242 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 STAT5AP42229 794 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TLE1Q04724 770 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 GALNT3Q14435 633 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 KHDC1Q4VXA5 237 aaKnown RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 SNAP47Q5SQN1 464 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 FAM182AQ5T1J6 154 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CLEC18BQ6UXF7 455 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TMEM26Q6ZUK4 368 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 H2AFVQ71UI9 128 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TMC3Q7Z5M5 1100 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 C11orf96Q7Z7L8 435 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TRAM1L1Q8N609 369 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CLEC18CQ8NCF0 446 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CCNYQ8ND76 341 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CCHCR1Q8TD31 782 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CPLX3Q8WVH0 158 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 CTNNBL1Q8WYA6 563 aaPredicted RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 GLYATL1Q969I3 302 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 ZNF830Q96NB3 372 aaPredicted RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 DNAJC7Q99615 494 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TIMM29Q9BSF4 260 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 SLC25A51Q9H1U9 297 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 EPN3Q9H201 632 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TRIT1Q9H3H1 467 aaKnown RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 GPN2Q9H9Y4 310 aaPredicted RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 ZFYVE1Q9HBF4 777 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 MAGEE1Q9HCI5 957 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 TRIM39Q9HCM9 518 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 ARFGAP3Q9NP61 516 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 ZNF624Q9P2J8 865 aaPredicted RBP10.16□□□□□ -0.78
VPS50-201ENST00000251739 ZNF711Q9Y462 761 aa10.16□□□□□ -0.78
VPS50-201ENST00000251739 HIVEP3Q5T1R4 2406 aa10.15□□□□□ -0.78
VPS50-201ENST00000251739 SYCE3A1L190 88 aa10.15□□□□□ -0.78
VPS50-201ENST00000251739 LRRD1A4D1F6 860 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms