RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 CCDC189A1A4V9 331 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 HDAC3O15379 428 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 CBX6O95503 412 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCCB-201ENST00000251654 XPAP23025 273 aaPredicted RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 TARSP26639 723 aaKnown RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 GALNT1Q10472 559 aaPredicted RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 HENMT1Q5T8I9 393 aaKnown RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 LIPIQ6XZB0 460 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 SMRP1Q8NCR6 262 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 UCMAQ8WVF2 138 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ARRDC3Q96B67 414 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ULK4Q96C45 1275 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 RILPQ96NA2 401 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ACOX2Q99424 681 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ABCG8Q9H221 673 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 FAM83DQ9H4H8 585 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 RNF112Q9ULX5 631 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 F5P12259 2224 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 GRID2O43424 1007 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 SLC25A14O95258 325 aaPredicted RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 SERPINA6P08185 405 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 GM2AP17900 193 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 GRIA2P42262 883 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 PFKFB4Q16877 469 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 GPRC6AQ5T6X5 926 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 EGFLAMQ63HQ2 1017 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ERAP2Q6P179 960 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ASRGL1Q7L266 308 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 TECPR1Q7Z6L1 1165 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 INPP5DQ92835 1189 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 TRMOQ9BU70 441 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 SPATA16Q9BXB7 569 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 FBRSL1Q9HCM7 1045 aaKnown RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 TNFRSF12AQ9NP84 129 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 TXLNGQ9NUQ3 528 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 ARMCX1Q9P291 453 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 APOBEC2Q9Y235 224 aaKnown RBP17.07■□□□□ 0.32
PCCB-201ENST00000251654 TRIOBPQ9H2D6 2365 aa17.07■□□□□ 0.32
PCCB-201ENST00000251654 CAPN14A8MX76 684 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 TMEM233B4DJY2 109 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 KLK8O60259 260 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 DIAPH2O60879 1101 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 SIX3O95343 332 aaPredicted RBP17.06■□□□□ 0.32
PCCB-201ENST00000251654 ITGB6P18564 788 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 SLC9B1Q4ZJI4 515 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 UNC50Q53HI1 259 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 SEL1L3Q68CR1 1132 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 SUSD6Q92537 303 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 CACNA2D2Q9NY47 1150 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 MBD1Q9UIS9 605 aaPredicted RBP17.06■□□□□ 0.32
PCCB-201ENST00000251654 TRIM33Q9UPN9 1127 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 CAPN7Q9Y6W3 813 aa17.06■□□□□ 0.32
PCCB-201ENST00000251654 RGSL1A5PLK6 1076 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SYCE1LA8MT33 242 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 FADS2P1A8MWK0 482 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SUPT3HB4E1H0 165 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 H0Y858 1186 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 UBFD1O14562 309 aaKnown RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 AREL1O15033 823 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 CCDC22O60826 627 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SUPT3HO75486 399 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SUPT7LO94864 414 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 TRIM16O95361 564 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 JUNP05412 331 aaKnown RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 ELFN1P0C7U0 828 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 GFAPP14136 432 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SOX9P48436 509 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 HTR4Q13639 388 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SH2D4BQ5SQS7 431 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SBSNQ6UWP8 590 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 ZBTB2Q8N680 514 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 ZSCAN5AQ9BUG6 496 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 RIOK2Q9BVS4 552 aaKnown RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 PRSS16Q9NQE7 514 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 LATS2Q9NRM7 1088 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 ARL8BQ9NVJ2 186 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 EPS15L1Q9UBC2 864 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 VTI1BQ9UEU0 232 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 LRRC14BA6NHZ5 514 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SLCO1B7G3V0H7 640 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 PSMD11O00231 422 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 ATP5HO75947 161 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 HK3P52790 923 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 ALDH18A1P54886 795 aaKnown RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 ENPP2Q13822 863 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 KRT72Q14CN4 511 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 TREML1Q86YW5 311 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 TRAM1L1Q8N609 369 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 STON2Q8WXE9 905 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 PTCD3Q96EY7 689 aaKnown RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 TTYH1Q9H313 450 aaPredicted RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 EML4Q9HC35 981 aaKnown RBP17.05■□□□□ 0.32
PCCB-201ENST00000251654 RAD18Q9NS91 495 aa17.05■□□□□ 0.32
PCCB-201ENST00000251654 SPATS2LQ9NUQ6 558 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms