RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF648Q5T619 568 aaPredicted RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 SNX20Q7Z614 316 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 C11orf96Q7Z7L8 435 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF547Q8IVP9 402 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PRELID2Q8N945 189 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 OR13C4Q8NGS5 318 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 MDM1Q8TC05 714 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 ZNF398Q8TD17 642 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 STYXQ8WUJ0 223 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 HEXDCQ8WVB3 486 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PATE1Q8WXA2 126 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PEX13Q92968 403 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 DNAJC1Q96KC8 554 aaKnown RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 TMEM74Q96NL1 305 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 RANBP9Q96S59 729 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 ASB8Q9H765 288 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 SARS2Q9NP81 518 aaKnown RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 KLC4Q9NSK0 619 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 NLE1Q9NVX2 485 aaPredicted RBP12.59□□□□□ -0.39
VPREB3-201ENST00000248948 CRLS1Q9UJA2 301 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 PCDHGA8Q9Y5G5 932 aa12.59□□□□□ -0.39
VPREB3-201ENST00000248948 ADAMTS20P59510 1910 aa12.58□□□□□ -0.39
VPREB3-201ENST00000248948 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 HEATR9A2RTY3 570 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 MROH6A6NGR9 719 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 AP3B1O00203 1094 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 CPNE6O95741 557 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 EML2O95834 649 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 APRTP07741 180 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 RALBP11234 206 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 EPHA4P54764 986 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 INHBCP55103 352 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 CCL7P80098 99 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 B4GALNT1Q00973 533 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 HHEXQ03014 270 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 SEPT6Q14141 434 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 CYP1B1Q16678 543 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 PLA2G4EQ3MJ16 856 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 GPR33Q49SQ1 333 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 BCL7AQ4VC05 210 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 WASH2PQ6VEQ5 465 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 GSTA5Q7RTV2 222 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 SLC9B2Q86UD5 537 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 NXPE1Q8N323 547 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 SLC35F6Q8N357 371 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 TAB3Q8N5C8 712 aaPredicted RBP12.58□□□□□ -0.4
VPREB3-201ENST00000248948 RASGEF1AQ8N9B8 481 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 DNAAF3Q8N9W5 541 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 GLIS1Q8NBF1 620 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 OR52K1Q8NGK4 314 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 TMEM159Q96B96 161 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 SH3KBP1Q96B97 665 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 DPYSL5Q9BPU6 564 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 STRADBQ9C0K7 418 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 OSGEPL1Q9H4B0 414 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 POLR1BQ9H9Y6 1135 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 CASS4Q9NQ75 786 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 WASH6PQ9NQA3 447 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 POT1Q9NUX5 634 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 SNX12Q9UMY4 172 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 KCTD3Q9Y597 815 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 DNMT3AQ9Y6K1 912 aaPredicted RBP12.58□□□□□ -0.4
VPREB3-201ENST00000248948 SLC30A1Q9Y6M5 507 aa12.58□□□□□ -0.4
VPREB3-201ENST00000248948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 TRBV5-4A0A0C4DH59 114 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 LILRA5A6NI73 299 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 CFAP99D6REC4 459 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 DUX1O43812 170 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 BRINP1O60477 761 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A9O60656 530 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A6P19224 532 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 MSH3P20585 1137 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A1P22309 533 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A4P22310 534 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 MC4RP32245 332 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 RPL22P35268 128 aaKnown RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A3P35503 534 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UGT1A5P35504 534 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 LSSP48449 732 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 UBE2IP63279 158 aaKnown RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 GABREP78334 506 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 BASP1P80723 227 aaKnown RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 CDK16Q00536 496 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 CYP4F3Q08477 520 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 SQSTM1Q13501 440 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 TBC1D25Q3MII6 688 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 IYDQ6PHW0 289 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 NLRP9Q7RTR0 991 aa12.57□□□□□ -0.4
VPREB3-201ENST00000248948 Q8N9G6 341 aaPredicted RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 WDR36Q8NI36 951 aaKnown RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 SNIP1Q8TAD8 396 aaKnown RBP12.57□□□□□ -0.4
VPREB3-201ENST00000248948 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms