RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 MBD2Q9UBB5 411 aa9.46□□□□□ -0.89
NUDCD1-201ENST00000239690 PCDHGA3Q9Y5H0 932 aa9.46□□□□□ -0.89
NUDCD1-201ENST00000239690 SNX4O95219 450 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ARIH2O95376 493 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 UBA1P22314 1058 aaKnown RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ADORA2AP29274 412 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SLC1A2P43004 574 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ALDH3B2P48448 385 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 NUMBP49757 651 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ATP4BP51164 291 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 MAPK12P53778 367 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SLC16A1P53985 500 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 OAZ1P54368 228 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 LGALS3BPQ08380 585 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ACSM2AQ08AH3 577 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 TBRG1Q3YBR2 411 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SYTL3Q4VX76 610 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 C10orf120Q5SQS8 335 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 DACT2Q5SW24 774 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ACSM2BQ68CK6 577 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 KIAA0930Q6ICG6 404 aaPredicted RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SLC27A1Q6PCB7 646 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 KRT74Q7RTS7 529 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 PQLC3Q8N755 202 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SPATA22Q8NHS9 363 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 NELL1Q92832 810 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SH3YL1Q96HL8 342 aaPredicted RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 SMAD5Q99717 465 aaKnown RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 KATNAL1Q9BW62 490 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 MED28Q9H204 178 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 FBRSL1Q9HCM7 1045 aaKnown RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 ITM2CQ9NQX7 267 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 EXD2Q9NVH0 621 aa9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 PAK1IP1Q9NWT1 392 aaPredicted RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.9
NUDCD1-201ENST00000239690 RRN3P2A6NIE6 340 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ACOX3O15254 700 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 BCAS1O75363 584 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 FABP3P05413 133 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 PGRP06401 933 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ODC1P11926 461 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 CDH5P33151 784 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ERVK-8P63133 956 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SPIBQ01892 262 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 RBM20Q5T481 1227 aaKnown RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 NCBP2-AS2Q69YL0 99 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 C11orf88Q6PI97 169 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 CYP4V2Q6ZWL3 525 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 CARM1Q86X55 608 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 UBE2J2Q8N2K1 259 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SPPL2BQ8TCT7 592 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 LGALS12Q96DT0 336 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SORT1Q99523 831 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ACAT2Q9BWD1 397 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 LHPPQ9H008 270 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 AASDHPPTQ9NRN7 309 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 BAIAP2Q9UQB8 552 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 FABP12A6NFH5 140 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 C9IYK1 514 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 AP2A2O94973 939 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 AHSGP02765 367 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 EPB42P16452 691 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 HOXA10P31260 410 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ARL2P36404 184 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ATXN1P54253 815 aaKnown RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 HERVK_113P63132 956 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 CDC73Q6P1J9 531 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 HACD2Q6Y1H2 254 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SLC15A3Q8IY34 581 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 OR8H3Q8N146 312 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 STK40Q8N2I9 435 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 MFSD2AQ8NA29 543 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 LPCAT1Q8NF37 534 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 PIH1D2Q8WWB5 315 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 C1GALT1C1Q96EU7 318 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SMARCD1Q96GM5 515 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 PEBP4Q96S96 227 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ERVK-6Q9BXR3 956 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 EMILIN2Q9BXX0 1053 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SMURF2Q9HAU4 748 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 GBA2Q9HCG7 927 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 AMBNQ9NP70 447 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SCUBE2Q9NQ36 999 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 PAQR5Q9NXK6 330 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ANKMY1Q9P2S6 941 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 FBXO9Q9UK97 447 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 MYO5AQ9Y4I1 1855 aaKnown RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 C7orf72A4D263 438 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 XYLBO75191 536 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 STX11O75558 287 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SLC25A27O95847 323 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 MZF1P28698 734 aaPredicted RBP9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 SDC2P34741 201 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 GNPDA1P46926 289 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 PLA2G16P53816 162 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 ERICH5Q6P6B1 374 aa9.45□□□□□ -0.9
NUDCD1-201ENST00000239690 FAM83AQ86UY5 434 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms